Chromosome BAC_Accession BAC_Name BAC_Length LeftCoor RightCoor Direction ContigName ContigLength Identity PLM_Type SNP_Base Indel_Size Left_Flank Right_Flank Restriction_site(N) Restriction_site(9) chr2 AP005873 B1370C05 47978 8830 8832 Plus Contig5073 12256 51 SNP C/G gacccctccctcctcgccga cccaacctcgccttcttccg Bsp1286I,BanII,CviJI chr2 AP005873 B1370C05 47978 9834 9836 Plus Contig5073 12256 51 SNP G/T ccacctaaggttaacactta cagtgcggttatattattca DdeI,BtsI chr2 AP005873 B1370C05 47978 10671 10673 Plus Contig5073 12256 51 SNP G/T tcgggaggtgcatctcccag gggggcttcccaggagggat BssKI,BseBI,ScrFI,AjnI TspRI,BsrI,BmrI chr2 AP005873 B1370C05 47978 10880 10882 Plus Contig5073 12256 51 SNP T/G attagctaccctcattggtt tcattccttgagatgacagt chr2 AP005873 B1370C05 47978 13832 13845 Plus Contig5073 12256 51 IND 12 atatagatatagatatagat ttagaggcaatgaactcgat chr2 AP005873 B1370C05 47978 14190 14192 Plus Contig5073 12256 51 SNP G/A tcaacctccgccaacacggc tcacgctagcttgacttttg BsaHI,Tsp45I,MaeIII SfaNI chr2 AP005873 B1370C05 47978 14202 14204 Plus Contig5073 12256 51 SNP T/C aacacggcgtcacgctagct gacttttgttcccgtcgtgc TaqI chr2 AP005873 B1370C05 47978 14246 14248 Plus Contig5073 12256 51 SNP A/G ccggtctcaggctcaagctc atgtctggtggcttgatctc TaqI chr2 AP005873 B1370C05 47978 14252 14254 Plus Contig5073 12256 51 SNP T/C tcaggctcaagctcaatgtc ggtggcttgatctcgacttc BsaWI,MspI chr2 AP005873 B1370C05 47978 14254 14256 Plus Contig5073 12256 51 SNP G/C aggctcaagctcaatgtctg tggcttgatctcgacttccg BstC8I chr2 AP005873 B1370C05 47978 14294 14296 Plus Contig5073 12256 51 SNP C/T gcccgcactcgcacgccatt cttggcttgatttcaatctc StyI,BsaJI chr2 AP005873 B1370C05 47978 14296 14298 Plus Contig5073 12256 51 SNP T/C ccgcactcgcacgccattcc tggcttgatttcaatctccg StyI BssKI,BseBI,ScrFI,AjnI chr2 AP005873 B1370C05 47978 14374 14376 Plus Contig5073 12256 51 SNP T/C gttcccgcacgcacgcattt ccagtctcgatttcaatctc chr2 AP005873 B1370C05 47978 14397 14399 Plus Contig5073 12256 51 SNP T/C agtctcgatttcaatctccg tttcgtcatgccccgtcttg TspGWI AciI chr2 AP005873 B1370C05 47978 14445 14447 Plus Contig5073 12256 51 SNP T/C actctcccatagtcccatgc ggcgcgccacccccggcctt NaeI,NgoAIV,BsrFI,MspI chr2 AP005873 B1370C05 47978 14483 14485 Plus Contig5073 12256 51 SNP C/G cttgacctctgccgtgtctc ccccgctcgacgtcgacctc chr2 AP005873 B1370C05 47978 14518 14520 Plus Contig5073 12256 51 SNP T/C gacctccaggcaccagcagg agcagcacccacacgctgtc BspMI BstC8I,Fnu4HI,BbvI,ApeKI chr2 AP005873 B1370C05 47978 14567 14569 Plus Contig5073 12256 51 SNP T/C cgagctcctatccaccaccc agcttgacctacgcggctcc BfaI BseYI chr2 AP005873 B1370C05 47978 14582 14584 Plus Contig5073 12256 51 SNP G/A caccctagcttgacctacgc gctccgtcgccccagcgtgc ThaI,TauI,BspLI BbvI,ApeKI,AluI chr2 AP005873 B1370C05 47978 14599 14601 Plus Contig5073 12256 51 SNP G/A cgcggctccgtcgccccagc tgccgtcctcaagctcgagc NspI,SphI,NlaIII,FatI,CviAII chr2 AP005873 B1370C05 47978 14627 14629 Plus Contig5073 12256 51 SNP C/T ctcaagctcgagctcttctc gccgccgtcggccctcgcta AciI chr2 AP005873 B1370C05 47978 14674 14676 Plus Contig5073 12256 51 SNP C/T cttcgttcttcacctacgcc gcacgtcgtccccgagctag FauI,AciI CviRI chr2 AP005873 B1370C05 47978 14705 14707 Plus Contig5073 12256 51 SNP T/C cccgagctagagctcctctc gccgtcgtcgcacctcgctt AciI chr2 AP005873 B1370C05 47978 14732 14734 Plus Contig5073 12256 51 SNP G/A gtcgcacctcgcttgacctc atattcagtagcactagcac TaqI SspI chr2 AP005873 B1370C05 47978 14780 14782 Plus Contig5073 12256 51 SNP A/G ttgggctcaagctcctctct ccgtcccggctcaacctcga TaaI BstMWI,BglI chr2 AP005873 B1370C05 47978 14845 14847 Plus Contig5073 12256 51 SNP C/G cgcgccatcccggagctcaa ctcctctccaccgccgtcgc BsaXI,MnlI SmlI,CviJI,AluI chr2 AP005873 B1370C05 47978 14864 14866 Plus Contig5073 12256 51 SNP G/A acctcctctccaccgccgtc cctccgtgactcgacttctg Hpy99I Tsp45I,MaeIII,MslI,AleI chr2 AP005873 B1370C05 47978 14896 14898 Plus Contig5073 12256 51 SNP T/C cgacttctgctgtacctgga gtacacgagctcctctttgc FokI,BseGI,TatI,Bsp1407I TaiI,MaeII chr2 AP005873 B1370C05 47978 14898 14900 Plus Contig5073 12256 51 SNP T/C acttctgctgtacctggatg acacgagctcctctttgctc TatI,Bsp1407I,Hpy8I,Csp6I,RsaI CviRI,SfaNI chr2 AP005873 B1370C05 47978 14918 14920 Plus Contig5073 12256 51 SNP C/G tacacgagctcctctttgct acgtcgcctaacatcgacct BmgBI ZraI,BsaHI,AatII chr2 AP005873 B1370C05 47978 14999 15002 Plus Contig5073 12256 51 IND 2 ccaaggctttagcgtgatct gcccacaccgccatgagatg chr2 AP005873 B1370C05 47978 15044 15046 Plus Contig5073 12256 51 SNP C/T gggtgaagttggaaagagat gacggtgtggtaggagatga DpnI,BstKTI,BfuCI,TaqI,Hpy99I chr2 AP005873 B1370C05 47978 15072 15074 Plus Contig5073 12256 51 SNP A/G tggtaggagatgagtcagcg actcgctggttccttcccaa MspA1I,HinfI,AciI chr2 AP005873 B1370C05 47978 15114 15115 Plus Contig5073 12256 51 IND -1 cgagaagtttcctttttttt ccctcagccacactggcagt chr2 AP005873 B1370C05 47978 20959 20963 Minus Contig30462 3132 99 IND 3 taaccccctcgggggggggg tcgggcccgagggtgatacg chr2 AP005873 B1370C05 47978 21735 21737 Minus Contig30462 3132 99 SNP G/C aaaaaaaaagaacgatccca aacgatcgggggctggctcg chr2 AP005873 B1370C05 47978 7751 7753 Minus Contig88868 667 100 IND 1 aggagcatgggatggtggca ggtcgttcggggcgtggtgc chr2 AP004187 OJ1435_F07 139041 43892 43894 Plus Contig10461 8071 90 SNP C/A actctatacataaaagttac aatattacttttgtcaccaa chr2 AP004187 OJ1435_F07 139041 43909 43911 Plus Contig10461 8071 90 SNP C/T taccaatattacttttgtca caagactaaggagaaattaa Tsp45I,MaeIII Hpy188III chr2 AP004187 OJ1435_F07 139041 43957 43959 Plus Contig10461 8071 90 SNP A/C tagatgctacaaaattaagg gtgaatataagcatgcaacc chr2 AP004187 OJ1435_F07 139041 43965 43967 Plus Contig10461 8071 90 SNP T/C acaaaattaaggagtgaata aagcatgcaaccaatgagta chr2 AP004187 OJ1435_F07 139041 44004 44006 Plus Contig10461 8071 90 SNP G/A tatttattagatgactcttt ggttctaatcaaatatttaa chr2 AP004187 OJ1435_F07 139041 44123 44125 Plus Contig10461 8071 90 SNP G/A tatgtctaacttttgtggat gaagaagtattttttttact FokI,BseGI chr2 AP004187 OJ1435_F07 139041 44156 44158 Plus Contig10461 8071 90 SNP A/G tttttactcgtagccttttc gaaaagttaacacagtacta chr2 AP004187 OJ1435_F07 139041 44503 44505 Plus Contig10461 8071 90 IND 1 tgaaccaagacatttttttt atttggatttgatattagaa chr2 AP004187 OJ1435_F07 139041 44583 44585 Plus Contig10461 8071 90 SNP T/C aaaaaaaattatgcatcatc ccagagtgtgtgtttggata Hpy188III FokI,BseGI chr2 AP004187 OJ1435_F07 139041 44621 44623 Plus Contig10461 8071 90 SNP G/A ataatggaaaatgggggtgg attgggattgagaaatagat Tsp509I chr2 AP004187 OJ1435_F07 139041 44638 44640 Plus Contig10461 8071 90 SNP A/G tgggattgggattgagaaat gatgaaggattatgattaaa FokI,BseGI chr2 AP004187 OJ1435_F07 139041 44647 44649 Plus Contig10461 8071 90 SNP A/G gattgagaaatagatgaagg ttatgattaaatgaaagaga chr2 AP004187 OJ1435_F07 139041 44718 44720 Plus Contig10461 8071 90 SNP T/C tggtgggtgggaaatcattt accatcccattagccaaaca chr2 AP004187 OJ1435_F07 139041 44788 44790 Plus Contig10461 8071 90 SNP T/C ttttcgcgaagcccttacaa gtacagtcctcctcctctat TatI,Bsp1407I TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 45088 45090 Plus Contig10461 8071 90 SNP T/G cggcagtacctactttagag gcaagtgacaggcttgttca CviRI MnlI chr2 AP004187 OJ1435_F07 139041 45090 51580 Plus Contig10461 8071 90 # chr2 AP004187 OJ1435_F07 139041 51697 51699 Plus Contig10461 8071 90 SNP G/T atacgaagtctcggagattt tcatttctattccttttaac chr2 AP004187 OJ1435_F07 139041 51736 51738 Plus Contig10461 8071 90 SNP A/G acaagggggtttaatcttgt tgttatttaatacattctac chr2 AP004187 OJ1435_F07 139041 51738 51740 Plus Contig10461 8071 90 SNP G/A aagggggtttaatcttgtat ttatttaatacattctacat chr2 AP004187 OJ1435_F07 139041 51865 51867 Plus Contig10461 8071 90 SNP G/A gcccaaattctgaaggtttg cagagacaagtttgggcctt chr2 AP004187 OJ1435_F07 139041 52048 52050 Plus Contig10461 8071 90 SNP T/A aacaacaactcgtcgtcgcg ctgcctagctagggtttccc Hpy188III,NruI chr2 AP004187 OJ1435_F07 139041 52277 52279 Plus Contig10461 8071 90 SNP T/C ccttccttccttccttcgaa catgcgcctcttcttcttag PfeI,HinfI chr2 AP004187 OJ1435_F07 139041 52703 52705 Plus Contig10461 8071 90 SNP C/T gagaaaacaaatagcactgg attttcagggagttcatgca chr2 AP004187 OJ1435_F07 139041 52719 52721 Plus Contig10461 8071 90 SNP A/G ctggcattttcagggagttc tgcaaaaattgataatggtc NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 52742 52744 Plus Contig10461 8071 90 SNP G/T caaaaattgataatggtcct atcctttgttctgatgaaaa Hpy188III,DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 53028 53030 Plus Contig10461 8071 90 SNP C/G atttcacatctaacctccta tgcttgattcatcagtattg BfaI chr2 AP004187 OJ1435_F07 139041 53194 53196 Plus Contig10461 8071 90 SNP A/G gtttgttgttctgatgaaaa catctctctcttttttttct SfaNI chr2 AP004187 OJ1435_F07 139041 53201 53203 Plus Contig10461 8071 90 SNP T/A gttctgatgaaaaacatctc ctcttttttttctttttctt chr2 AP004187 OJ1435_F07 139041 54050 54052 Plus Contig10461 8071 90 SNP G/A ctaaagacaatataaattgc ttatgccgtgattctgaaat CviRI chr2 AP004187 OJ1435_F07 139041 54053 54055 Plus Contig10461 8071 90 SNP A/T aagacaatataaattgcgtt tgccgtgattctgaaattaa chr2 AP004187 OJ1435_F07 139041 54719 54720 Plus Contig10461 8071 90 IND -1 tgctattgctgatttttttt ctttttaatgatgatgaatg chr2 AP004187 OJ1435_F07 139041 54720 54721 Plus Contig10461 8071 90 IND -1 gctattgctgattttttttc tttttaatgatgatgaattg chr2 AP004187 OJ1435_F07 139041 54884 54886 Plus Contig10461 8071 90 SNP G/T cacattgcatactgtcatag acgcaaaccggatattgatt HgaI Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 54925 54927 Plus Contig10461 8071 90 SNP T/C ctgatattaagaatgtgtag agaatacatgctaccagtgt chr2 AP004187 OJ1435_F07 139041 55155 55157 Plus Contig10461 8071 90 SNP C/T tttcctctagctctccgagc cagagaagtttcaccggtcg SacI,Ecl136II,BsiHKAI,AluI,DdeI,BspCNI,BseMII,Hpy188I chr2 AP004187 OJ1435_F07 139041 55564 55566 Plus Contig10461 8071 90 SNP G/A aagacatacaccattcatga aaagttacttgtacgtttcg chr2 AP004187 OJ1435_F07 139041 55583 55585 Plus Contig10461 8071 90 SNP C/A agaaagttacttgtacgttt gatctaatgagcaagacatc TaqI BstYI,BglII chr2 AP004187 OJ1435_F07 139041 56159 56161 Plus Contig10461 8071 90 SNP A/G aatttatttggcgactaatg taatttactactcgtagtat chr2 AP004187 OJ1435_F07 139041 56338 56340 Plus Contig10461 8071 90 SNP G/C gaagcattacgatggtggtg tgctgcgtggagaaaataag Fnu4HI,ApeKI chr2 AP004187 OJ1435_F07 139041 56713 56715 Plus Contig10461 8071 90 SNP C/T gtgggggaagatggatcgag gaggagaaatatattagcga chr2 AP004187 OJ1435_F07 139041 57006 57008 Plus Contig10461 8071 90 SNP C/A cctagctagaagacgacgag cgagacgatcctctttctct CviJI chr2 AP004187 OJ1435_F07 139041 57089 57090 Plus Contig10461 8071 90 IND -3 taatctcctcctcctcctcg ctatctgtcggactctcttg chr2 AP004187 OJ1435_F07 139041 57115 57117 Plus Contig10461 8071 90 SNP A/G gtcggactctcttgggctgg ccccaatcatattctatatg AvaII EcoO109I,Bsp120I,Bsp1286I,Bme1580I,BanII,ApaI,CviJI,BspLI,BshFI,Sau96I,BseYI chr2 AP004187 OJ1435_F07 139041 57188 57190 Plus Contig10461 8071 90 SNP C/T cccttaacttgacaacgagt tgatgtcatcctttaacaga AhdI,PleI,MlyI,HinfI,Hpy188I,Hin4I chr2 AP004187 OJ1435_F07 139041 57202 57204 Plus Contig10461 8071 90 SNP T/C acgagtctgatgtcatcctt aacagaaaaaaaaaaacaga MseI chr2 AP004187 OJ1435_F07 139041 57208 57210 Plus Contig10461 8071 90 IND 1 ctgatgtcatcctttaacag aaaaaaaaaacagatataac chr2 AP004187 OJ1435_F07 139041 57241 57243 Minus Contig122528 621 90 SNP C/T gatataacggatcactcaac gtcataaccggtgtaatatt chr2 AP004187 OJ1435_F07 139041 57241 57243 Plus Contig10461 8071 90 SNP C/T gatataacggatcactcaac gtcataaccggtgtaatatt chr2 AP004187 OJ1435_F07 139041 57246 57248 Plus Contig10461 8071 90 SNP T/G aacggatcactcaaccgtca aaccggtgtaatattgttga Hpy188I chr2 AP004187 OJ1435_F07 139041 57246 57248 Minus Contig122528 621 90 SNP T/G aacggatcactcaaccgtca aaccggtgtaatattgttga Hpy188I chr2 AP004187 OJ1435_F07 139041 57253 57254 Minus Contig122528 621 90 IND -1 cactcaaccgtcataaccgg tgtaatattgttgacgaaaa chr2 AP004187 OJ1435_F07 139041 57265 57266 Minus Contig122528 621 90 IND -1 ataaccggtgtaatattgtt gacgaaaaaatcgaacacac chr2 AP004187 OJ1435_F07 139041 57277 57279 Plus Contig10461 8071 90 SNP G/A atattgttgacgaaaaaatc aacacaccggcctaggagat TaqI chr2 AP004187 OJ1435_F07 139041 57277 57279 Minus Contig122528 621 90 SNP G/A atattgttgacgaaaaaatc aacacaccggcctaggagat TaqI chr2 AP004187 OJ1435_F07 139041 57302 57304 Plus Contig10461 8071 90 SNP T/C caccggcctaggagatctgc tagctcttgtgcaggtccaa Bpu1102I,DdeI BfaI chr2 AP004187 OJ1435_F07 139041 57302 57304 Minus Contig122528 621 90 SNP T/C caccggcctaggagatctgc tagctcttgtgcaggtccaa Bpu1102I,DdeI BfaI chr2 AP004187 OJ1435_F07 139041 57415 57417 Plus Contig10461 8071 90 SNP C/T acagtcgatcggatgacaag cgatggagtagttccagccg CviJI TaqI chr2 AP004187 OJ1435_F07 139041 57415 57417 Minus Contig122528 621 90 SNP C/T acagtcgatcggatgacaag cgatggagtagttccagccg CviJI TaqI chr2 AP004187 OJ1435_F07 139041 57418 81392 Plus Contig10461 8071 90 # chr2 AP004187 OJ1435_F07 139041 57583 57585 Minus Contig122528 621 90 SNP T/C atctagtataaaccaatcgg aaataatgatatgataaata chr2 AP004187 OJ1435_F07 139041 57650 57652 Minus Contig122528 621 90 SNP T/C catcggctggaggtccgatg catgaaatccacaatattag Hpy188III,RcaI SfaNI chr2 AP004187 OJ1435_F07 139041 57662 57664 Minus Contig122528 621 90 SNP C/T gtccgatgtcatgaaatcca aatattagattaaacagtga chr2 AP004187 OJ1435_F07 139041 57695 57697 Minus Contig122528 621 90 SNP C/T aacagtgaaacatttgttgt atcggctaaatccaacttat chr2 AP004187 OJ1435_F07 139041 81411 81413 Plus Contig10461 8071 90 SNP C/A gtttcactgtttaatctaat tttgtggatttcatgacatc SspI chr2 AP004187 OJ1435_F07 139041 81414 81416 Plus Contig10461 8071 90 IND 1 tcactgtttaatctaatctt gtggatttcatgacatcgta chr2 AP004187 OJ1435_F07 139041 81415 81417 Plus Contig10461 8071 90 SNP G/A cactgtttaatctaatcttt tggatttcatgacatcgtac chr2 AP004187 OJ1435_F07 139041 81427 81429 Plus Contig10461 8071 90 SNP A/G taatctttgtggatttcatg catcgtacctccagccgatg Hpy188III,RcaI SfaNI chr2 AP004187 OJ1435_F07 139041 81433 81435 Plus Contig10461 8071 90 SNP T/G ttgtggatttcatgacatcg acctccagccgatgtgtgct Csp6I,RsaI Hpy188I,AvaII,Sau96I chr2 AP004187 OJ1435_F07 139041 81459 81461 Plus Contig10461 8071 90 SNP T/C cagccgatgtgtgctttaac ttcggatcgatgcttattta chr2 AP004187 OJ1435_F07 139041 81468 81470 Plus Contig10461 8071 90 SNP G/A tgtgctttaactttcggatc atgcttatttatcatatcat ClaI,TaqI chr2 AP004187 OJ1435_F07 139041 81473 81475 Plus Contig10461 8071 90 SNP T/C tttaactttcggatcgatgc tatttatcatatcattattt chr2 AP004187 OJ1435_F07 139041 81494 81496 Plus Contig10461 8071 90 SNP A/G tatttatcatatcattattt ccgattaatttatactggat chr2 AP004187 OJ1435_F07 139041 81501 81503 Plus Contig10461 8071 90 SNP A/G catatcattatttaccgatt atttatactggattatattg VspI,MseI,Tsp509I chr2 AP004187 OJ1435_F07 139041 81511 81513 Plus Contig10461 8071 90 SNP G/A tttaccgattaatttatact gattatattgttattttatt BsrI BfaI chr2 AP004187 OJ1435_F07 139041 81535 81537 Plus Contig10461 8071 90 SNP C/T tatattgttattttattaca catcatcagccgattgcctt BccI chr2 AP004187 OJ1435_F07 139041 81604 81606 Plus Contig10461 8071 90 SNP G/T ccgattgcttaaaccctatc ctatcggctggtattggcat chr2 AP004187 OJ1435_F07 139041 81619 81621 Plus Contig10461 8071 90 SNP T/A ctatcgctatcggctggtat ggcatcggctattatcggct chr2 AP004187 OJ1435_F07 139041 81637 81639 Plus Contig10461 8071 90 SNP G/T attggcatcggctattatcg ctatcggctagaactactcc CviJI chr2 AP004187 OJ1435_F07 139041 81647 81649 Plus Contig10461 8071 90 SNP A/G gctattatcggctatcggct gaactactccatcggcttgt BfaI chr2 AP004187 OJ1435_F07 139041 81661 81663 Plus Contig10461 8071 90 SNP G/A taggctagaactactccatc gcttgtcagccgatcggctg AluI chr2 AP004187 OJ1435_F07 139041 81670 81672 Plus Contig10461 8071 90 SNP G/T actactccatcggcttgtca ccgatcggctgttttgatct CviJI Hpy188I chr2 AP004187 OJ1435_F07 139041 81678 81680 Plus Contig10461 8071 90 SNP G/A atcggcttgtcagccgatcg ctgttttgatctactatttg CviJI TaqI,TaaI chr2 AP004187 OJ1435_F07 139041 22738 22740 Minus Contig22448 4469 92 SNP A/G gcctcgccgtcgcccgagcg ccgccggcgaagccgcgcgg BstMWI,BglI,NotI,EaeI,EagI,CviJI,BshFI,AciI,BsrBI chr2 AP004187 OJ1435_F07 139041 22753 22755 Minus Contig22448 4469 92 SNP G/A gagcgaccgccggcgaagcc cgcggccgcaaggacggcgg TauI,Fnu4HI,AciI,ThaI,Hin6I,HhaI chr2 AP004187 OJ1435_F07 139041 22757 22759 Minus Contig22448 4469 92 SNP G/A gaccgccggcgaagccgcgc gccgcaaggacggcggcagc ThaI,TauI,NotI,EaeI,Bsh1285I,EagI,BshFI BbvI,ApeKI chr2 AP004187 OJ1435_F07 139041 22775 22777 Minus Contig22448 4469 92 SNP A/G gcggccgcaaggacggcggc gcggggcgctcctcgtctcc BbvI,ApeKI,MspA1I TauI chr2 AP004187 OJ1435_F07 139041 22823 22825 Minus Contig22448 4469 92 SNP C/T cgggcggcctggggagccgc cggaatggcgacggcggtgt BssKI,ScrFI,NciI,MspI BsrBI,Hpy188I chr2 AP004187 OJ1435_F07 139041 22828 22830 Minus Contig22448 4469 92 SNP A/G ggcctggggagccgcccgga tggcgacggcggtgtccgcc chr2 AP004187 OJ1435_F07 139041 22854 22856 Minus Contig22448 4469 92 SNP C/T acggcggtgtccgccagatc gcgccgttccggccggatct AciI,AlwI,ThaI BglII chr2 AP004187 OJ1435_F07 139041 22856 22858 Minus Contig22448 4469 92 SNP C/T ggcggtgtccgccagatccg gccgttccggccggatctgg BstMWI,AciI,ThaI,Hin6I,HhaI TspGWI chr2 AP004187 OJ1435_F07 139041 22893 22895 Minus Contig22448 4469 92 SNP C/T ctggcgggatgggctggcgg ggggacgacgacggcagcgg TauI,Fnu4HI chr2 AP004187 OJ1435_F07 139041 22899 22900 Minus Contig22448 4469 92 IND -3 ggatgggctggcggcgggga cgacgacggcagcggggacg chr2 AP004187 OJ1435_F07 139041 22901 22902 Minus Contig22448 4469 92 IND -12 atgggctggcggcggggacg acgacggcagcggggacggc chr2 AP004187 OJ1435_F07 139041 22907 22908 Minus Contig22448 4469 92 IND -2 tggcggcggggacgacgacg gcagcggggacgggcgaccg chr2 AP004187 OJ1435_F07 139041 22908 22909 Minus Contig22448 4469 92 IND -1 ggcggcggggacgacgacgg cagcggggacgggcgacgtg chr2 AP004187 OJ1435_F07 139041 22909 22911 Minus Contig22448 4469 92 SNP A/G gcggcggggacgacgacggc gcggggacgggcgacggtgg BbvI,ApeKI,MspA1I TauI chr2 AP004187 OJ1435_F07 139041 22939 22941 Minus Contig22448 4469 92 SNP T/C ggcgacggtggcggtcgagg gagttgcgccgggtggtgtt HphI chr2 AP004187 OJ1435_F07 139041 22948 22950 Minus Contig22448 4469 92 SNP C/T ggcggtcgaggtgagttgcg cgggtggtgttgtgggtgac Hin6I,HhaI,BssKI,MspI,ScrFI,NciI Hpy99I chr2 AP004187 OJ1435_F07 139041 23013 23015 Minus Contig22448 4469 92 SNP T/C ggggtggcgatggtggaggc gcggatccggcggtggcgca ApeKI BshFI,TauI,MspA1I,SacII,BstDSI,BsaJI,AciI,ThaI chr2 AP004187 OJ1435_F07 139041 23030 23032 Minus Contig22448 4469 92 SNP C/A ggctgcggatccggcggtgg gcacccggatccggcggcgg Hin6I,HhaI Bsp1286I,BsiHKAI chr2 AP004187 OJ1435_F07 139041 23045 23047 Minus Contig22448 4469 92 SNP C/T ggtggcgcacccggatccgg ggcggcgcggcagccggcgg TauI,Fnu4HI BsaWI chr2 AP004187 OJ1435_F07 139041 23057 23059 Minus Contig22448 4469 92 SNP A/G ggatccggcggcggcgcggc gccggcggaggcaagagcac BbvI,ApeKI TauI,EaeI,Bsh1285I,EagI,BshFI chr2 AP004187 OJ1435_F07 139041 23114 23116 Minus Contig22448 4469 92 SNP A/G tgccactggcgtcggccggc ttggtggagaggaagacggc chr2 AP004187 OJ1435_F07 139041 23170 23172 Minus Contig22448 4469 92 SNP C/T gcccagatccaacgcgtcct gggtgggaacagggtggttg MnlI,AvaI XcmI,StyI chr2 AP004187 OJ1435_F07 139041 23181 23183 Minus Contig22448 4469 92 SNP A/G acgcgtcctcgggtgggaac gggtggttggagtccgatcg chr2 AP004187 OJ1435_F07 139041 23198 23200 Minus Contig22448 4469 92 SNP A/G aacagggtggttggagtccg tcgtcgtgcaggtggtgtga Hpy188I,PvuI,BcgI,DpnI,BstKTI,BfuCI BsaWI,MspI chr2 AP004187 OJ1435_F07 139041 23255 23257 Minus Contig22448 4469 92 SNP G/A cggtgtgcaggtgacatttg tggctcccgtcgtggatgct chr2 AP004187 OJ1435_F07 139041 23353 23355 Minus Contig22448 4469 92 SNP T/C cgacgcccttgggcgccgtt accttcttgaaggcgttgct chr2 AP004187 OJ1435_F07 139041 23423 23425 Minus Contig22448 4469 92 SNP C/T gagttttctccgggtgaaaa ctagattcgttaggatcgga XbaI,Hpy188III chr2 AP004187 OJ1435_F07 139041 23479 23481 Minus Contig22448 4469 92 SNP G/A gtcggcgtaaccttcttgaa gcttcgttttaggagtttat HindIII,AluI chr2 AP004187 OJ1435_F07 139041 23592 23594 Minus Contig22448 4469 92 SNP A/G cgtgctgttgtaaggttttt ggtctgatttcccttataaa chr2 AP004187 OJ1435_F07 139041 23597 23599 Minus Contig22448 4469 92 SNP T/C tgttgtaaggtttttaggtc gatttcccttataaactgga AvaII,Sau96I chr2 AP004187 OJ1435_F07 139041 23599 23601 Minus Contig22448 4469 92 SNP A/G ttgtaaggtttttaggtctg tttcccttataaactggatc Hpy188I chr2 AP004187 OJ1435_F07 139041 23635 23637 Minus Contig22448 4469 92 SNP C/T ggatcaactctcttcttcta ggtgaatcgcaggagctccc TaaI chr2 AP004187 OJ1435_F07 139041 23696 23698 Minus Contig22448 4469 92 SNP A/G aaaagtgtagcatgtgtact ttcgtactgtgtactatcta TaaI chr2 AP004187 OJ1435_F07 139041 24565 24567 Minus Contig22448 4469 92 SNP T/A catgcatacataaatgcaaa gatgcctagaatcgggcgcc chr2 AP004187 OJ1435_F07 139041 24567 24856 Minus Contig22448 4469 92 # chr2 AP004187 OJ1435_F07 139041 25019 25021 Minus Contig22448 4469 92 IND 1 ctcgctaacaacctccgcat cccctgcgtactctggtgtc chr2 AP004187 OJ1435_F07 139041 25023 25025 Minus Contig22448 4469 92 IND 1 ctaacaacctccgcattccc tgcgtactctggtgatcttg chr2 AP004187 OJ1435_F07 139041 25035 25037 Minus Contig22448 4469 92 SNP G/A gcattcccctgcgtactctg tgatcttggtatcctaggaa HphI Hpy188I chr2 AP004187 OJ1435_F07 139041 25078 25080 Minus Contig22448 4469 92 SNP A/G atggtgtgagcgaaatgaat aattttttgaaacactgcat TspDTI chr2 AP004187 OJ1435_F07 139041 25119 25121 Minus Contig22448 4469 92 SNP A/G cgccaccggcatccatcctc ccaagataaaagaggaaggt chr2 AP004187 OJ1435_F07 139041 25151 25153 Minus Contig22448 4469 92 SNP T/C gaggaaggtcaggcatgagt aaagtaggagcctctaagct MseI PleI,MlyI,HinfI chr2 AP004187 OJ1435_F07 139041 25156 25158 Minus Contig22448 4469 92 SNP T/C aggtcaggcatgagttaaag aggagcctctaagcttcaag chr2 AP004187 OJ1435_F07 139041 25169 25171 Minus Contig22448 4469 92 SNP G/A gttaaagtaggagcctctaa cttcaagagttcggaatctt DdeI,HindIII,CviJI,AluI chr2 AP004187 OJ1435_F07 139041 25206 25208 Minus Contig22448 4469 92 SNP T/C tcttgagagatatcacttaa catcaccttttgcgggctta BccI chr2 AP004187 OJ1435_F07 139041 25275 25277 Minus Contig22448 4469 92 SNP C/T attctatcgtcctgtatttt cccatctctatcaatatacg chr2 AP004187 OJ1435_F07 139041 25328 25330 Minus Contig22448 4469 92 IND 1 tgccctcctttcaaaaaaaa caaacacatgaatcacaata chr2 AP004187 OJ1435_F07 139041 25488 25490 Minus Contig22448 4469 92 SNP G/A tagctgggcgaatattatta tgttttgacgcatgcatgcc VspI,MseI chr2 AP004187 OJ1435_F07 139041 25662 25664 Minus Contig22448 4469 92 SNP A/G attgtgatagtagatgatca gtgaggagctatagagatcg HphI chr2 AP004187 OJ1435_F07 139041 25723 25725 Minus Contig22448 4469 92 SNP C/G ctgacgtgcaacctggtgac aggcaacggcaacgaggtgg BstEII,BssKI,BseBI,BslI,ScrFI,AjnI chr2 AP004187 OJ1435_F07 139041 25808 25810 Minus Contig22448 4469 92 SNP A/C ccacctgctgcaccgccctg aacgaggtgtcaccgctgac CviRI,AlfI chr2 AP004187 OJ1435_F07 139041 25976 25977 Minus Contig22448 4469 92 IND -3 acgacgaaaagaagaagaag cagccgatgctgcagcagag chr2 AP004187 OJ1435_F07 139041 26079 26083 Minus Contig22448 4469 92 IND 3 taaaggcggcggccctcctc gtctccgtcgcagcggcggt chr2 AP004187 OJ1435_F07 139041 26169 26170 Minus Contig22448 4469 92 IND -3 cgcctaataataataataat tcaatccccccaccctcctg chr2 AP004187 OJ1435_F07 139041 26201 26219 Minus Contig22448 4469 92 IND 17 ccctcctgctgccctgcctg cttgctaaatacatatatat chr2 AP004187 OJ1435_F07 139041 26534 26536 Minus Contig22448 4469 92 SNP C/T ataatgctggccattcataa ctactactcctctcatctgc chr2 AP004187 OJ1435_F07 139041 26662 26664 Minus Contig22448 4469 92 IND 1 atggttgccaactgccaaaa gggtactcctcttcttctaa chr2 AP004187 OJ1435_F07 139041 26758 26760 Minus Contig22448 4469 92 SNP A/T atatatactactgtttgatc tgatgagcaggtccgtgtac BclI,RcaI,NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 26989 26990 Minus Contig22448 4469 92 IND -5 atccttgtttgattgcaagg aaagaaaatccatatcccgg chr2 AP004187 OJ1435_F07 139041 27055 27057 Minus Contig22448 4469 92 SNP A/T ttctatcggttcaacatggt aatcggttatattaatttta MseI chr2 AP004187 OJ1435_F07 139041 27161 27163 Minus Contig22448 4469 92 SNP C/T tgtgactacgaataagaaag gcattgattcggcagaaaat Hin6I,HhaI CviRI chr2 AP004187 OJ1435_F07 139041 27351 27353 Minus Contig22448 4469 92 IND 1 ttcatcgtacttaagaacaa tgtcagagtacaaacctttc chr2 AP004187 OJ1435_F07 139041 27363 27365 Minus Contig22448 4469 92 IND 1 aagaacaaatgtcagagtac aaccttctcagtaacaacac chr2 AP004187 OJ1435_F07 139041 2592 2600 Minus Contig19038 5533 93 IND 7 gttggtctggaaatgctcca aggcagaaaagcaaagtatc chr2 AP004187 OJ1435_F07 139041 2601 2616 Minus Contig19038 5533 93 IND 14 gaaatgctccagcttgtcag tatccagctgcacggggcgc chr2 AP004187 OJ1435_F07 139041 2786 2788 Minus Contig19038 5533 93 SNP A/C atcggatgagtttgtgcaca gcgtctaccatgcatgttta MluI,AflIII,ThaI chr2 AP004187 OJ1435_F07 139041 2843 2845 Minus Contig19038 5533 93 SNP A/C cacgattatgataattcacc atcgtaaaatctttctaatt TaqII,BccI chr2 AP004187 OJ1435_F07 139041 2849 2851 Minus Contig19038 5533 93 SNP A/C tatgataattcaccaatcgt aaatctttctaattattaac chr2 AP004187 OJ1435_F07 139041 2948 2950 Minus Contig19038 5533 93 SNP A/C aaaactaaaaaagaaatcat catgtaatgtagagttgttc NspI,BspLU11I,AflIII chr2 AP004187 OJ1435_F07 139041 2952 2954 Minus Contig19038 5533 93 SNP G/T ctaaaaaagaaatcatacat taatgtagagttgttctctc NspI,BspLU11I,AflIII,NlaIII,FatI,CviAII MseI chr2 AP004187 OJ1435_F07 139041 3021 3023 Minus Contig19038 5533 93 SNP C/T ggtgccgtaataatgtagtg agttttcaacaaccaaaaaa BsgI,CviRI chr2 AP004187 OJ1435_F07 139041 3157 3169 Minus Contig19038 5533 93 IND 11 taagtagtagtgctacactc ggaattctaagggcccttta chr2 AP004187 OJ1435_F07 139041 3184 3185 Minus Contig19038 5533 93 IND -1 cataggaattctaagggccc tttaaatcgtaagaatgaaa chr2 AP004187 OJ1435_F07 139041 3195 3197 Minus Contig19038 5533 93 SNP A/G taagggccctttaaatcgta gaatgaaaaaacagaggaat chr2 AP004187 OJ1435_F07 139041 3245 3247 Minus Contig19038 5533 93 SNP C/T acaagattctgacaggaata aattgtaaaatagaggattg MunI chr2 AP004187 OJ1435_F07 139041 3256 3258 Minus Contig19038 5533 93 SNP T/C acaggaatacaattgtaaaa agaggattgcaaaacacagg chr2 AP004187 OJ1435_F07 139041 3266 3268 Minus Contig19038 5533 93 IND 1 aattgtaaaatagaggattg aaaacacaggaaaaacacag chr2 AP004187 OJ1435_F07 139041 3271 3273 Minus Contig19038 5533 93 IND 1 taaaatagaggattgcaaaa acaggaaaaacacaggaatg chr2 AP004187 OJ1435_F07 139041 3275 3283 Minus Contig19038 5533 93 IND 7 atagaggattgcaaaacaca cacaggaatgactgtttgtg chr2 AP004187 OJ1435_F07 139041 3284 3287 Minus Contig19038 5533 93 IND 2 tgcaaaacacaggaaaaaca ggaatgactgtttgattgga chr2 AP004187 OJ1435_F07 139041 3294 3296 Minus Contig19038 5533 93 SNP T/C aggaaaaacacaggaatgac gtttgattggaacacaggaa chr2 AP004187 OJ1435_F07 139041 3306 3308 Minus Contig19038 5533 93 SNP A/C ggaatgactgtttgattgga cacaggaaaaacgcaggaat AvaII,Sau96I chr2 AP004187 OJ1435_F07 139041 3340 3343 Minus Contig19038 5533 93 IND 2 caggaatcagatgagagaga gagactcagaggaaatgtca chr2 AP004187 OJ1435_F07 139041 3342 3344 Minus Contig19038 5533 93 SNP G/T ggaatcagatgagagagaga agactcagaggaaatgttcc chr2 AP004187 OJ1435_F07 139041 3375 3377 Minus Contig19038 5533 93 SNP C/T aatgttccaagaggttagac tcttgctaacttttctccaa MnlI chr2 AP004187 OJ1435_F07 139041 3401 3403 Minus Contig19038 5533 93 SNP G/A ctaacttttctccaaaatgt cataggattacacattctat CviRI TatI,Bsp1407I,Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 3419 3421 Minus Contig19038 5533 93 SNP T/C gtgcataggattacacattc atatgaattttaaaggattg NdeI chr2 AP004187 OJ1435_F07 139041 3423 3425 Minus Contig19038 5533 93 SNP T/G ataggattacacattctata gaattttaaaggattggata TspDTI SfcI chr2 AP004187 OJ1435_F07 139041 3468 3470 Minus Contig19038 5533 93 SNP C/T tcaatcctttgtttcaaagg cttcattggatttttttcca StuI,CviJI,BshFI chr2 AP004187 OJ1435_F07 139041 3486 3487 Minus Contig19038 5533 93 IND -1 ggccttcattggattttttt ccataggattgaaatcctcc chr2 AP004187 OJ1435_F07 139041 3487 3489 Minus Contig19038 5533 93 SNP C/T gccttcattggatttttttc ataggattgaaatcctccaa SfcI chr2 AP004187 OJ1435_F07 139041 3505 3507 Minus Contig19038 5533 93 SNP C/T tccataggattgaaatcctc aaaattcctacatttttcct chr2 AP004187 OJ1435_F07 139041 3516 3518 Minus Contig19038 5533 93 SNP C/T gaaatcctccaaaattccta atttttcctacaaatcaaag chr2 AP004187 OJ1435_F07 139041 3710 3712 Minus Contig19038 5533 93 SNP T/C tgtcctgtaaccgtgagtct tctctgtttaaatttcaaaa BsmAI chr2 AP004187 OJ1435_F07 139041 3795 3800 Minus Contig19038 5533 93 IND 4 ccctccgtactttaatatat gacgccgttgactttttgac chr2 AP004187 OJ1435_F07 139041 3843 3847 Minus Contig19038 5533 93 IND 3 gtttgacctttcgtcttatt aaaaaaatttatgtaattat chr2 AP004187 OJ1435_F07 139041 3846 3848 Minus Contig19038 5533 93 SNP A/C ttacctttcgtcttatttaa aaaaaatttatgtaattata DraI chr2 AP004187 OJ1435_F07 139041 3981 3983 Minus Contig19038 5533 93 SNP A/G ggtcaaacgttggttaaaaa tcaacgacgtcatacattaa Hpy8I,HincII chr2 AP004187 OJ1435_F07 139041 4000 4005 Minus Contig19038 5533 93 IND 4 aatcaacgacgtcatacatt tacggagggtagcatttatt chr2 AP004187 OJ1435_F07 139041 4005 4014 Minus Contig19038 5533 93 IND 8 acgacgtcatacattaaaat tagcatttattaacattttt chr2 AP004187 OJ1435_F07 139041 4014 4019 Minus Contig19038 5533 93 IND 4 tacattaaaatacggagggt tttattaacatttttttaaa chr2 AP004187 OJ1435_F07 139041 4021 4023 Minus Contig19038 5533 93 IND 1 aaatacggagggtagcattt ttaacatttttttaaaaaaa chr2 AP004187 OJ1435_F07 139041 4023 4038 Minus Contig19038 5533 93 IND 14 atacggagggtagcatttat aaaaaaataaaatcgtaatg chr2 AP004187 OJ1435_F07 139041 4057 4059 Minus Contig19038 5533 93 SNP T/G aaaaaaataaaatcgtaatg actgaatatgtaacttcatc TatI,Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 4095 4097 Minus Contig19038 5533 93 SNP A/G atctgcttagaatattcatc gaatggaagtagacagaata chr2 AP004187 OJ1435_F07 139041 4188 4190 Minus Contig19038 5533 93 SNP T/C gtggagctcgccgcaggcgg ggctgtcgcgtcgcctgccg BstMWI chr2 AP004187 OJ1435_F07 139041 4234 4236 Minus Contig19038 5533 93 SNP C/T gccggacctccctgtgaccc gtgagccgtggcgcctggag chr2 AP004187 OJ1435_F07 139041 4317 4319 Minus Contig19038 5533 93 SNP A/G aaagggaggaggaagaagat agggggggtatgacatgtgg chr2 AP004187 OJ1435_F07 139041 4325 4326 Minus Contig19038 5533 93 IND -6 gaggaagaagataagggggg gtatgacatgtggggcccac chr2 AP004187 OJ1435_F07 139041 4349 4350 Minus Contig19038 5533 93 IND -1 gacatgtggggcccacgtgg tcccacttttatttttatta chr2 AP004187 OJ1435_F07 139041 4360 4361 Minus Contig19038 5533 93 IND -1 cccacgtggtcccactttta tttttattatttgatgtgtg chr2 AP004187 OJ1435_F07 139041 4400 4402 Minus Contig19038 5533 93 SNP C/T aaaatgacatgtgggtccca gtgctttattatttttccgg BsaAI,AcvI,TaiI,MaeII NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 4493 4495 Minus Contig19038 5533 93 SNP A/T acgtaggtgccacgtcagcc aaaccgctgagggaccttgt chr2 AP004187 OJ1435_F07 139041 4501 4503 Minus Contig19038 5533 93 SNP T/C gccacgtcagccaaaaccgc gagggaccttgtttgcccgg MspA1I,DdeI BsaJI chr2 AP004187 OJ1435_F07 139041 4558 4560 Minus Contig19038 5533 93 SNP A/G gacgggtcgtatccggtttt cggtcaagggacgaaaatcg TaaI chr2 AP004187 OJ1435_F07 139041 4581 4582 Minus Contig19038 5533 93 IND -2 gtcaagggacgaaaatcgga ctgtgcgacaaatagaggga chr2 AP004187 OJ1435_F07 139041 4592 4594 Minus Contig19038 5533 93 IND 1 aaaatcggactgtgcgacaa tagagggacccaaagtgaac chr2 AP004187 OJ1435_F07 139041 4604 4606 Minus Contig19038 5533 93 IND 1 tgcgacaaatagagggaccc aagtgaacttattgctagct chr2 AP004187 OJ1435_F07 139041 5449 5451 Minus Contig19038 5533 93 SNP C/A ggctggtgtacaccaacgat agggagagatcgtcaaagga DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 5511 5513 Minus Contig19038 5533 93 SNP T/G aagctaggagtctgatcatg aatagcagttagattgtact chr2 AP004187 OJ1435_F07 139041 5729 5731 Minus Contig19038 5533 93 SNP A/G cgaggagcacgacgactaca gttcaacggcctggcgtggc SfcI chr2 AP004187 OJ1435_F07 139041 6092 6109 Minus Contig19038 5533 93 IND 16 cctaattactttctttcttg taggcatcgactggcttgac chr2 AP004187 OJ1435_F07 139041 6225 6236 Minus Contig19038 5533 93 IND 10 taatccctttttatctcgat gcatgcgcaacctgcatacg chr2 AP004187 OJ1435_F07 139041 6263 6265 Minus Contig19038 5533 93 SNP T/C aacctgcatacgccatcttg tgtactcgatctgatctcat chr2 AP004187 OJ1435_F07 139041 6272 6283 Minus Contig19038 5533 93 IND 10 acgccatcttgttgtactcg atctgatgagatgcatgtat chr2 AP004187 OJ1435_F07 139041 6283 6457 Minus Contig19038 5533 93 # chr2 AP004187 OJ1435_F07 139041 6560 6562 Minus Contig19038 5533 93 SNP C/T cctatataaagcggaaaacg cactcgtctccttcttcctt BstMWI TaiI,MaeII,Tsp45I,MaeIII chr2 AP004187 OJ1435_F07 139041 6614 6615 Minus Contig19038 5533 93 IND -9 ccgcatcgccgccgccgccg gagagggagagagagagaga chr2 AP004187 OJ1435_F07 139041 6642 6644 Minus Contig19038 5533 93 SNP G/T gagagagagagagagagaga agagagagagcgagagatga chr2 AP004187 OJ1435_F07 139041 6649 6654 Minus Contig19038 5533 93 IND 4 agagagagagagagagagag cgagagatgaagacgatctt chr2 AP004187 OJ1435_F07 139041 6654 6656 Minus Contig19038 5533 93 SNP G/A gagagagagagagagagagc agagatgaagacgatcttgg chr2 AP004187 OJ1435_F07 139041 7219 7221 Minus Contig19038 5533 93 SNP T/G cctacattcagcttcggatt ctgctctagttagtcttgca Fnu4HI,ApeKI chr2 AP004187 OJ1435_F07 139041 7707 7709 Minus Contig19038 5533 93 SNP A/T acaatgcttcgttatgtcag ctgttactactttaatttgc Hpy188I,TaaI chr2 AP004187 OJ1435_F07 139041 7819 7820 Minus Contig19038 5533 93 IND -4 tgcttcccaaatctatctat tatataattaaaggaataga chr2 AP004187 OJ1435_F07 139041 7858 7860 Minus Contig19038 5533 93 SNP T/G aaaaaggagcttccacgttc ctctcatggcttagaaattc BstMWI chr2 AP004187 OJ1435_F07 139041 7890 7892 Minus Contig19038 5533 93 SNP A/G tagaaattctcacattaatc gagaaaaagaaaaagcagag chr2 AP004187 OJ1435_F07 139041 7923 7925 Minus Contig19038 5533 93 SNP T/A aagcagagtccatatagaaa acaatttagaaatagctgaa chr2 AP004187 OJ1435_F07 139041 7947 7949 Minus Contig19038 5533 93 SNP G/T atttagaaatagctgaaatt ggaataaaaaaataaggaat ApoI chr2 AP004187 OJ1435_F07 139041 7953 7955 Minus Contig19038 5533 93 SNP A/T aaatagctgaaattgggaat aaaaaataaggaatattaga Tsp509I,MseI chr2 AP004187 OJ1435_F07 139041 73750 73752 Plus Contig117247 718 94 IND 1 tcgtcttattcaaaaaattt ggaattattatttatttttt chr2 AP004187 OJ1435_F07 139041 74352 74354 Plus Contig117247 718 94 IND 1 gtccagtttgacccctagca ttgaatagctggatttggga chr2 AP004187 OJ1435_F07 139041 40329 40331 Minus Contig27850 3476 96 SNP G/C gcaacttatgatacagtata cggtgtggccgtcaacctct Hpy8I,BstZ17I,AccI,BsrFI,BsaWI,PinAI,MspI chr2 AP004187 OJ1435_F07 139041 40337 40339 Minus Contig27850 3476 96 SNP G/C tgatacagtatagcggtgtg ccgtcaacctcttcaactaa EaeI,CviJI,BshFI Bsp1286I,Bme1580I chr2 AP004187 OJ1435_F07 139041 40799 40801 Minus Contig27850 3476 96 SNP G/C aacctaaggaggaggaggag agtcttgtgtgcttgccatt BseRI,PleI,MlyI,HinfI chr2 AP004187 OJ1435_F07 139041 41150 41152 Minus Contig27850 3476 96 SNP C/T tttgtcgtttgtaagataat taagagagaagatgggatgt DdeI Tsp509I,MseI chr2 AP004187 OJ1435_F07 139041 41153 41155 Minus Contig27850 3476 96 SNP A/G gtcgtttgtaagataatcta gagagaagatgggatgtcac DdeI BfaI chr2 AP004187 OJ1435_F07 139041 42118 42120 Minus Contig27850 3476 96 SNP A/G catatcccgcgcattgcagc ggaaatttaaaaatacttta MspA1I chr2 AP004187 OJ1435_F07 139041 42303 42305 Minus Contig27850 3476 96 SNP T/C acaatgttgacttttttaaa atgtttgatcgttcgtctta NspI,BspLU11I,AflIII,NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 42312 42314 Minus Contig27850 3476 96 SNP T/C acttttttaaatatgtttga cgttcgtcttatttaaaaaa DpnI,BstKTI,BfuCI AhdI,TaaI chr2 AP004187 OJ1435_F07 139041 42333 42335 Minus Contig27850 3476 96 SNP A/T cgttcgtcttatttaaaaaa ttaagtaattattaattctt ApoI chr2 AP004187 OJ1435_F07 139041 42356 42358 Minus Contig27850 3476 96 SNP C/T aagtaattattaattctttt ctatcatttaatttattgtt chr2 AP004187 OJ1435_F07 139041 42420 42422 Minus Contig27850 3476 96 SNP A/T gagttttacatatttcacaa agattttgaataagacgaac chr2 AP004187 OJ1435_F07 139041 42433 42435 Minus Contig27850 3476 96 SNP A/G ttcacaaaagattttgaata gacgaacggtcagatatgta chr2 AP004187 OJ1435_F07 139041 42448 42450 Minus Contig27850 3476 96 SNP T/C gaataagacgaacggtcaga atgtataaaaagaaaagtca NspI,BspLU11I,AflIII,NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 42453 42455 Minus Contig27850 3476 96 SNP A/T agacgaacggtcagatatgt taaaaagaaaagtcaacggc DraI,MseI chr2 AP004187 OJ1435_F07 139041 42643 42645 Minus Contig27850 3476 96 SNP G/A ttgagatcaaagcataagaa gatccaaaggctactatatt BspLI,BamHI,AlwI chr2 AP004187 OJ1435_F07 139041 42673 42675 Minus Contig27850 3476 96 SNP G/A gctactatattctagatgat tgactgaattaatgcatatt Tsp45I,MaeIII chr2 AP004187 OJ1435_F07 139041 42679 42681 Minus Contig27850 3476 96 SNP G/C atattctagatgatgtgact aattaatgcatatttaattt HinfI,PleI,MlyI chr2 AP004187 OJ1435_F07 139041 42709 42710 Minus Contig27850 3476 96 IND -1 atatttaatttttggtgcca aatatatatatatatataat chr2 AP004187 OJ1435_F07 139041 42710 42711 Minus Contig27850 3476 96 IND -1 tatttaatttttggtgccaa atatatatatatatatatta chr2 AP004187 OJ1435_F07 139041 42775 42776 Minus Contig27850 3476 96 IND -8 tatagtgtgtgtgtgtgtgt ttgaatttactatgagtagt chr2 AP004187 OJ1435_F07 139041 42829 42831 Minus Contig27850 3476 96 IND 1 atagtaagagtgtttttttt cgcgaacgcatcaatatata chr2 AP004187 OJ1435_F07 139041 42831 42833 Minus Contig27850 3476 96 SNP G/A agtaagagtgtttttttttc cgaacgcatcaatatattag NruI,ThaI chr2 AP004187 OJ1435_F07 139041 42870 42871 Minus Contig27850 3476 96 IND -1 agaatgaaaagagttttttt gttacacaatgtaattggcc chr2 AP004187 OJ1435_F07 139041 42900 42902 Minus Contig27850 3476 96 SNP G/A gtaattggccagacaagcgt tgccaggggaaggaaaatta chr2 AP004187 OJ1435_F07 139041 43188 43190 Minus Contig27850 3476 96 SNP A/G cgccatggttcctgccctcg cagcaattcgctgctcttgg TaqI BslI,BsaJI,Fnu4HI,BbvI,ApeKI chr2 AP004187 OJ1435_F07 139041 43228 43235 Minus Contig27850 3476 96 IND 6 gaaatcccgcccgagcccga cgactcccgtatggccacgc chr2 AP004187 OJ1435_F07 139041 43316 43318 Minus Contig27850 3476 96 SNP A/G aggcggcgccgccgccgccg cctcccgcctcgacgccgac NaeI,NgoAIV,BstC8I,BsrFI,MspI,CviJI,BshFI chr2 AP004187 OJ1435_F07 139041 43390 43392 Minus Contig27850 3476 96 SNP T/C tggaattaattcgaattgaa aatgtcgttatgggcctgca chr2 AP004187 OJ1435_F07 139041 43459 43476 Minus Contig27850 3476 96 IND 16 gatggatggccacatgaatg ggagatggatggatccaagt chr2 AP004187 OJ1435_F07 139041 43591 43593 Minus Contig27850 3476 96 SNP A/T gcatgcgttgtggtcgacca gagcgcgcggttggcggacc NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 43595 43597 Minus Contig27850 3476 96 SNP C/A gcgttgtggtcgaccaagag gcgcggttggcggaccgaaa Hin6I,BstC8I,BssHII,HhaI,ThaI chr2 AP004187 OJ1435_F07 139041 43597 43603 Minus Contig27850 3476 96 IND 5 gttgtggtcgaccaagagcg ttggcggaccgaaactcact chr2 AP004187 OJ1435_F07 139041 43603 43605 Minus Contig27850 3476 96 SNP T/A gtcgaccaagagcgcgcggt ggcggaccgaaactcacgct chr2 AP004187 OJ1435_F07 139041 43605 43607 Minus Contig27850 3476 96 IND 1 cgaccaagagcgcgcggttg cggaccgaaactcacgctaa chr2 AP004187 OJ1435_F07 139041 43607 43609 Minus Contig27850 3476 96 IND 1 accaagagcgcgcggttggc gaccgaaactcacgcttaat chr2 AP004187 OJ1435_F07 139041 43608 43610 Minus Contig27850 3476 96 SNP G/A ccaagagcgcgcggttggcg accgaaactcacgcttaatt EciI,RsrII,AvaII,Sau96I,TaqII,Hin4I,AciI PpiI chr2 AP004187 OJ1435_F07 139041 43716 43718 Minus Contig27850 3476 96 SNP T/C tccttcattatattgttcct ttgctctatttgctaaataa MnlI chr2 AP004187 OJ1435_F07 139041 43752 43754 Minus Contig27850 3476 96 IND 1 aataaataatttcccacgca ttaattatgaaaggaaaaac chr2 AP004187 OJ1435_F07 139041 61605 61607 Minus Contig16168 6239 96 SNP C/G ccttttttctcatttcagaa ctttttcatttatatccttg HindIII,CviJI,AluI chr2 AP004187 OJ1435_F07 139041 61608 61610 Minus Contig16168 6239 96 SNP T/G tttttctcatttcagaacct tttcatttatatccttgtta AlwNI chr2 AP004187 OJ1435_F07 139041 61645 61646 Minus Contig16168 6239 96 IND -1 gttaatgcaggatttattac tagatgcagtagagtttttt chr2 AP004187 OJ1435_F07 139041 61671 61672 Minus Contig16168 6239 96 IND -1 cagtagagttttttttttct tatggccctataccagtact chr2 AP004187 OJ1435_F07 139041 61752 61754 Minus Contig16168 6239 96 SNP A/G ttggacatctgattagacta tacctgagctaatttatgcc SpeI,BfaI,Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 62967 62969 Minus Contig16168 6239 96 SNP A/C gtagtaacaaacaggaaaac ggacgcacatacatatacat BsaWI,MspI chr2 AP004187 OJ1435_F07 139041 63115 63117 Minus Contig16168 6239 96 IND 1 gctgcaaagcgttaatacat gtatgaggaggagtgttttg chr2 AP004187 OJ1435_F07 139041 63593 63595 Minus Contig16168 6239 96 SNP T/C tagaatacgtcagtaaaccg gagacgaatttagcctattt TaaI AciI,ThaI chr2 AP004187 OJ1435_F07 139041 63616 63618 Minus Contig16168 6239 96 SNP C/G gacgaatttagcctatttaa ccatcattagcaaatgttta CviJI chr2 AP004187 OJ1435_F07 139041 63619 63621 Minus Contig16168 6239 96 SNP A/G gaatttagcctatttaaccc tcattagcaaatgtttattg BccI chr2 AP004187 OJ1435_F07 139041 63644 63646 Minus Contig16168 6239 96 SNP C/A tagcaaatgtttattgtagc cacattgtgaaatcatggag CviJI chr2 AP004187 OJ1435_F07 139041 63653 63655 Minus Contig16168 6239 96 SNP G/A tttattgtagcccacattgt aaatcatggagaaattaagt DraIII chr2 AP004187 OJ1435_F07 139041 63671 63673 Minus Contig16168 6239 96 SNP A/G gtgaaatcatggagaaatta gtttaaaagatttgtctcgc MseI chr2 AP004187 OJ1435_F07 139041 63673 63675 Minus Contig16168 6239 96 SNP T/C gaaatcatggagaaattaag ttaaaagatttgtctcgcaa DraI HindIII,CviJI,AluI chr2 AP004187 OJ1435_F07 139041 63770 63771 Minus Contig16168 6239 96 IND -9 tatgtgttcaaatgttctat gtgatatggtgtaattttat chr2 AP004187 OJ1435_F07 139041 63782 63784 Minus Contig16168 6239 96 SNP A/G tgttctatgtgatatggtgt attttttttttgtgtgtggg Tsp509I chr2 AP004187 OJ1435_F07 139041 63846 63848 Minus Contig16168 6239 96 SNP A/G gagccatcaacaaggcaatg gaaacgtagagagagatgat chr2 AP004187 OJ1435_F07 139041 63923 63925 Minus Contig16168 6239 96 SNP T/C attaaaaacatcaaacttac gcttcaaggagatcaacgca BslI,AciI chr2 AP004187 OJ1435_F07 139041 64452 64454 Minus Contig16168 6239 96 SNP A/G caaattcttaaagtactagt ttgaatcataagagtatata chr2 AP004187 OJ1435_F07 139041 64936 64938 Minus Contig16168 6239 96 SNP C/A gtgataaggtcgctcgccgc gccacatccaccgttaccac TauI,AciI BbvI,ApeKI,CviJI chr2 AP004187 OJ1435_F07 139041 65131 65133 Minus Contig16168 6239 96 SNP A/G tctgactgacctggtttcat gggaggcgccattgcaattg NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 65213 65214 Minus Contig16168 6239 96 IND -3 acacaacttagaggaagaag gaggaggaggtgtatataag chr2 AP004187 OJ1435_F07 139041 65300 65337 Minus Contig16168 6239 96 IND 36 gaagaagaagaagaagaaga gaggaggttagctaggttag chr2 AP004187 OJ1435_F07 139041 65779 65781 Minus Contig16168 6239 96 SNP A/G tagaaatggattacatctct gttctaccaatgggtacata BfaI chr2 AP004187 OJ1435_F07 139041 65810 65812 Minus Contig16168 6239 96 IND 1 tgggtacatagtaaaaaaaa tcttaaagtaagaagaaaac chr2 AP004187 OJ1435_F07 139041 65842 65843 Minus Contig16168 6239 96 IND -1 gaagaaagacataaaaaaaa ggtgatgggggcatatcccc chr2 AP004187 OJ1435_F07 139041 66127 66129 Minus Contig16168 6239 96 SNP T/C aagagttgtacctagtagta tgtccacgtgattttacaga TatI,ScaI,Csp6I,RsaI,TaaI chr2 AP004187 OJ1435_F07 139041 66990 66992 Minus Contig16168 6239 96 SNP G/A gtgcaccttaattaagggtt tcatgagggggacaagcaaa chr2 AP004187 OJ1435_F07 139041 69554 69565 Plus Contig37637 2290 96 IND 10 tattactctctctctctctc ccaaaatataacaactacgc chr2 AP004187 OJ1435_F07 139041 69722 69724 Plus Contig37637 2290 96 SNP T/C atggatcagatatctcgatc gtgtagtgtatatactagta chr2 AP004187 OJ1435_F07 139041 69795 69797 Plus Contig37637 2290 96 SNP G/T ccgaggttggccttgacggc tccatgtaggtgtagttcct Tth111I,BsaHI CviJI chr2 AP004187 OJ1435_F07 139041 70268 70297 Plus Contig37637 2290 96 IND 28 attaccaacactgcaacatc atgaatccttggcgggagcg chr2 AP004187 OJ1435_F07 139041 70493 70495 Plus Contig37637 2290 96 SNP A/C tttaattacatatactacat agataagaaaaacatatata Hpy188I chr2 AP004187 OJ1435_F07 139041 70628 70630 Plus Contig37637 2290 96 SNP G/A aagaagatcgatagatagat gtactcccccactaggatga TatI,ScaI chr2 AP004187 OJ1435_F07 139041 70688 70690 Plus Contig37637 2290 96 SNP A/G ctacttgctccctccgtccc aatataaacacaatattata Hpy188III chr2 AP004187 OJ1435_F07 139041 70715 70716 Plus Contig37637 2290 96 IND -4 aacacaatattatatatata gtaccgtttttactttttct chr2 AP004187 OJ1435_F07 139041 70845 70847 Plus Contig37637 2290 96 SNP C/T ggtttataaatatttaacgt taacacaagattctgtcaaa AclI,MseI chr2 AP004187 OJ1435_F07 139041 71052 71054 Plus Contig37637 2290 96 SNP C/T attattgaacttaccactta atatctaaccattcaccatg chr2 AP004187 OJ1435_F07 139041 71075 71077 Plus Contig37637 2290 96 SNP T/C atctaaccattcaccatgta atgcatatactctatgcagt TatI,Bsp1407I,Csp6I,RsaI,NspI,NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 71107 71109 Plus Contig37637 2290 96 SNP T/A ctatgcagtagttatttttt aaaaaaatcttacaaataat chr2 AP004187 OJ1435_F07 139041 71191 71193 Plus Contig37637 2290 96 SNP A/G gtttctaaatatttgacacc tttactttttagcacatgtt TaaI,Hpy8I chr2 AP004187 OJ1435_F07 139041 71239 71241 Plus Contig37637 2290 96 SNP T/A tcgtcttattcaaaaacttt gtgaaatatataaaactata chr2 AP004187 OJ1435_F07 139041 71291 71327 Plus Contig37637 2290 96 IND 35 aagtatatttaacaatgaat caaatgataggagaagaatt chr2 AP004187 OJ1435_F07 139041 71439 71441 Plus Contig37637 2290 96 SNP A/G acatattttaaaattttgaa gcatcaaatatttagaaacg chr2 AP004187 OJ1435_F07 139041 71467 71469 Plus Contig37637 2290 96 SNP G/T atatttagaaacggagggag atatatagaacatttgcagt MnlI chr2 AP004187 OJ1435_F07 139041 71696 71698 Plus Contig37637 2290 96 SNP A/G aatggacaacatggtgttag ccccacatgcggcaatccct EcoO109I,CviJI,BspLI,BshFI,Sau96I,BstMWI chr2 AP004187 OJ1435_F07 139041 15215 15217 Plus Contig12326 7737 97 SNP T/C cacattttactagtctgaaa cttactgctgaaacatgaaa chr2 AP004187 OJ1435_F07 139041 15720 15722 Plus Contig12326 7737 97 SNP C/A gtaagtagagtgctctctca cttttcttcactttatgggc chr2 AP004187 OJ1435_F07 139041 15967 15969 Plus Contig12326 7737 97 SNP A/T cgagagccatcgcttttttc ttttttttttggaggaatat chr2 AP004187 OJ1435_F07 139041 15973 15974 Plus Contig12326 7737 97 IND -1 ccatcgcttttttcattttt tttttggaggaatatcaata chr2 AP004187 OJ1435_F07 139041 16096 16098 Plus Contig12326 7737 97 SNP T/C acagcaagaagctagcacat acatacatacatatattgtt chr2 AP004187 OJ1435_F07 139041 17054 17056 Plus Contig12326 7737 97 SNP G/C ctgtggctgctgctgcaggg aagctgaccaagaaataccc BstC8I chr2 AP004187 OJ1435_F07 139041 17233 17235 Plus Contig12326 7737 97 SNP C/T ggtaattaatcaattaatta atatgccttgctaatagtac NdeI chr2 AP004187 OJ1435_F07 139041 17294 17311 Plus Contig12326 7737 97 IND 16 atacagatgaattaattgtg cagggggtgatggcgtctgg chr2 AP004187 OJ1435_F07 139041 17350 17352 Plus Contig12326 7737 97 SNP C/T agtagggtacctgataatga atggtgtgtggggaagaggg NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 17489 17505 Plus Contig12326 7737 97 IND 15 atatgtatatagtactatgc tatatatatatgtatatgca chr2 AP004187 OJ1435_F07 139041 17666 17676 Plus Contig12326 7737 97 IND 9 gcagctgcctcctcggtggt ttgttgtcctgaacccaagc chr2 AP004187 OJ1435_F07 139041 18111 18113 Plus Contig12326 7737 97 SNP G/A ttatagagtaacggtgatat cctcatatttatctatttta chr2 AP004187 OJ1435_F07 139041 18131 18133 Plus Contig12326 7737 97 SNP A/G gcctcatatttatctatttt ttaattatttttttctattt VspI chr2 AP004187 OJ1435_F07 139041 18156 18158 Plus Contig12326 7737 97 IND 1 ttatttttttctattttttt atagctatttagacaacacg chr2 AP004187 OJ1435_F07 139041 18175 18177 Plus Contig12326 7737 97 SNP C/A tcatagctatttagacaaca gtaacgacatagaagaaatg AflIII,BsaAI,TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 18208 18210 Plus Contig12326 7737 97 SNP T/G aagaaatgaggggacatctt tgggacaaaaatctatctcc chr2 AP004187 OJ1435_F07 139041 18293 18294 Plus Contig12326 7737 97 IND -3 ctgtactgtaagtggacaat gaaaagaagataagagtgat chr2 AP004187 OJ1435_F07 139041 18688 18690 Plus Contig12326 7737 97 SNP T/C ggcttacctcaaaaccatgt ggccctcttctggtcggacc chr2 AP004187 OJ1435_F07 139041 18729 18731 Plus Contig12326 7737 97 SNP A/G agtggatacatggccgctct tggcctttatggcgccggac chr2 AP004187 OJ1435_F07 139041 18733 18735 Plus Contig12326 7737 97 SNP C/A gatacatggccgctctatgg ctttatggcgccggaccttc CviJI,BshFI,BstMWI,BglI chr2 AP004187 OJ1435_F07 139041 18943 18945 Plus Contig12326 7737 97 SNP C/T ccgtctggtatggcgttgga gggggaacagtgctactcgg FokI,BseGI chr2 AP004187 OJ1435_F07 139041 19169 19171 Plus Contig12326 7737 97 SNP T/C gcgcaaggagcttgaaatgg gaaccacatcctactcgact HphI,Hpy8I chr2 AP004187 OJ1435_F07 139041 19296 19298 Plus Contig12326 7737 97 SNP T/C gactggtggccgtttgcggt tgctagggccgcttcccaga chr2 AP004187 OJ1435_F07 139041 19427 19429 Plus Contig12326 7737 97 SNP T/C ctcgccggtcttggaggtgt agtttccatcctccaagagg chr2 AP004187 OJ1435_F07 139041 19434 19436 Plus Contig12326 7737 97 SNP C/T gtcttggaggtgttagtttc atcctccaagagggtcgcct BccI chr2 AP004187 OJ1435_F07 139041 19450 19452 Plus Contig12326 7737 97 SNP C/T tttccatcctccaagagggt gcctctggtccttagctagt chr2 AP004187 OJ1435_F07 139041 19613 19615 Plus Contig12326 7737 97 SNP G/A tgcaagggccagtccattcc ttgtgctatgtaactaaaac chr2 AP004187 OJ1435_F07 139041 19619 19621 Plus Contig12326 7737 97 SNP C/T ggccagtccattccgttgtg tatgtaactaaaactctatt chr2 AP004187 OJ1435_F07 139041 19621 19623 Plus Contig12326 7737 97 SNP A/G ccagtccattccgttgtgct tgtaactaaaactctatttc chr2 AP004187 OJ1435_F07 139041 19689 19691 Plus Contig12326 7737 97 SNP C/T gtgcgttcgcgaaaaaaata accttattaatgtattcgtt chr2 AP004187 OJ1435_F07 139041 19951 19953 Plus Contig12326 7737 97 SNP T/C actctacaaattaatataca gttcaaattcaactgctata NspI,BspLU11I,NlaIII,FatI,CviAII TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 19995 19996 Plus Contig12326 7737 97 IND -4 tgtaaataaaaacaataaat aaatataattatgcaggtat chr2 AP004187 OJ1435_F07 139041 20072 20074 Plus Contig12326 7737 97 SNP G/A tgttacagcctatacaagtc aattaattaatatgataaga TaqI chr2 AP004187 OJ1435_F07 139041 20129 20131 Plus Contig12326 7737 97 SNP A/T aattaatttatcttgtcaaa ttttaaaatgtttttttgta chr2 AP004187 OJ1435_F07 139041 20140 20142 Plus Contig12326 7737 97 IND 1 cttgtcaaaattttaaaatg ttttttgtaagtatttagat chr2 AP004187 OJ1435_F07 139041 20171 20173 Plus Contig12326 7737 97 SNP C/G gtatttagatgatatatatg agatgtagatgtcaattgag CviRI chr2 AP004187 OJ1435_F07 139041 20330 20332 Plus Contig12326 7737 97 SNP T/G aattaatggacgtgaagaaa cgcgcgaattgaacgagcga Hin6I,BstC8I,BssHII,HhaI chr2 AP004187 OJ1435_F07 139041 20468 20471 Plus Contig12326 7737 97 IND 2 atgtgtttatatatatatat tccatctagcctaccatagc chr2 AP004187 OJ1435_F07 139041 20594 20596 Plus Contig12326 7737 97 SNP T/G ggacgtacgccacgctacta catcatatcaatccccgatc BfaI,SfaNI chr2 AP004187 OJ1435_F07 139041 20690 20703 Plus Contig12326 7737 97 IND 12 agctagcttggagaccgatc atatgtcgattcgattcgat chr2 AP004187 OJ1435_F07 139041 20754 20755 Plus Contig12326 7737 97 IND -3 agaagcagcagcagcagcag aagcgtggtgatgatgtgag chr2 AP004187 OJ1435_F07 139041 20991 20993 Plus Contig12326 7737 97 SNP T/G ctcgccatgctcgccacccg atggccatcgaccacgccac BssKI,ScrFI,NciI,MspI,FokI,BseGI,BsaBI chr2 AP004187 OJ1435_F07 139041 21072 21074 Plus Contig12326 7737 97 SNP G/T cccgaggattcttcgtcgcc tcggacgcgcgcgcacggtt Hpy99I chr2 AP004187 OJ1435_F07 139041 21417 21418 Plus Contig12326 7737 97 IND -1 actccttattaatttgcatt ctcatcgatcgatcatccct chr2 AP004187 OJ1435_F07 139041 21454 21455 Plus Contig12326 7737 97 IND -3 cgctggaatttcttcttctt ttacttaaattattattatt chr2 AP004187 OJ1435_F07 139041 21475 21485 Plus Contig12326 7737 97 IND 9 tacttaaattattattatta attgctgattgaattgaata chr2 AP004187 OJ1435_F07 139041 21611 21613 Plus Contig12326 7737 97 SNP T/C tcctgttgatttggtacata gttcacatgtgcatggtttc NdeI TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 21647 21649 Plus Contig12326 7737 97 IND 1 gtttcgatctcaatgatcaa tgtaaaaatattgctcatga chr2 AP004187 OJ1435_F07 139041 21670 21672 Plus Contig12326 7737 97 IND 1 taaaaatattgctcatcgat taagaaattcagatcaacaa chr2 AP004187 OJ1435_F07 139041 21676 21677 Plus Contig12326 7737 97 IND -9 tattgctcatcgatctaaga aattcagatcaacaagaaaa chr2 AP004187 OJ1435_F07 139041 21831 21832 Plus Contig12326 7737 97 IND -2 ctggattatctttttttttt ctaaagaaaacaatatcttt chr2 AP004187 OJ1435_F07 139041 22156 22158 Plus Contig12326 7737 97 SNP C/T atttggctaaacaaggacaa taagatatcacaactaagaa DdeI Tsp509I,MseI chr2 AP004187 OJ1435_F07 139041 22162 22164 Plus Contig12326 7737 97 SNP T/G ctaaacaaggacaactaaga atcacaactaagaagctaga EcoRV DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 22223 22225 Plus Contig12326 7737 97 SNP C/T tagttgagagcagagcaaag tgttcaggtttcggttgcaa CviJI,AluI chr2 AP004187 OJ1435_F07 139041 22261 22263 Plus Contig12326 7737 97 SNP C/T caacataactgctaaccact gcagaacgaacggcttgagt CviRI chr2 AP004187 OJ1435_F07 139041 22293 22295 Plus Contig12326 7737 97 SNP A/C ggcttgagtagtgtatacta tagtcttagaattaacacat SpeI,BfaI chr2 AP004187 OJ1435_F07 139041 22347 22349 Plus Contig12326 7737 97 SNP T/C cgataaataattttttaatg taggtgatgtacgcgtcaaa BfaI chr2 AP004187 OJ1435_F07 139041 22455 22457 Plus Contig12326 7737 97 SNP C/A atatcagtgataggtgacgt cacatcgacagtgatgtgac ZraI,BsaHI,AatII Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 22681 22683 Plus Contig12326 7737 97 SNP C/A gcggctcgggaggcgacgac cggccgcccctctcccccac BssKI,ScrFI,NciI,MspI BceAI chr2 AP004187 OJ1435_F07 139041 22850 22852 Plus Contig12326 7737 97 IND 1 ggcgacggcggtgtccgcca atccgcgccgttccggccga chr2 AP004187 OJ1435_F07 139041 22870 22872 Plus Contig12326 7737 97 IND 1 gatccgcgccgttccggccg atctggcgggatgggctggc chr2 AP004187 OJ1435_F07 139041 22880 22882 Plus Contig12326 7737 97 IND 1 gttccggccggatctggcgg atgggctggcggcggggacg chr2 AP004187 OJ1435_F07 139041 22887 22889 Plus Contig12326 7737 97 IND 1 ccggatctggcgggatgggc ggcggcggggacgacgacgg chr2 AP004187 OJ1435_F07 139041 22894 22896 Plus Contig12326 7737 97 IND 1 tggcgggatgggctggcggc gggacgacgacggcagcggg chr2 AP004187 OJ1435_F07 139041 38497 38499 Minus Contig35573 2525 97 SNP T/A ctctgaatctgcaaacatac tacctgtatgttggcaacaa chr2 AP004187 OJ1435_F07 139041 39791 39793 Minus Contig35573 2525 97 SNP G/C ttcatttgacatttatttct tctgttttctatggaactag chr2 AP004187 OJ1435_F07 139041 39929 39931 Minus Contig35573 2525 97 SNP T/C ctcacatatcctttttgacg ccacagtttggatgctctgt ZraI,AatII,TaiI,MaeII,Hpy8I HgaI chr2 AP004187 OJ1435_F07 139041 40228 40230 Minus Contig35573 2525 97 IND 1 ggaaatttctccaaaaaaaa aagaagaagaagaggaggag chr2 AP004187 OJ1435_F07 139041 40239 40241 Minus Contig35573 2525 97 SNP A/G caaaaaaaagaagaagaaga gaggaggaggatgtttgaaa MboII BseRI,Bst6I chr2 AP004187 OJ1435_F07 139041 40799 40801 Minus Contig35573 2525 97 SNP G/C aacctaaggaggaggaggag agtcttgtgtgcttgccatt BseRI,PleI,MlyI,HinfI chr2 AP004187 OJ1435_F07 139041 58707 58709 Plus Contig32923 2871 97 SNP G/C tataattgatggttttgtcc acgtgacaatttaacctgag Hpy188I,Hpy99I BsmFI,BslFI,BsaAI,AcvI chr2 AP004187 OJ1435_F07 139041 58744 58746 Plus Contig32923 2871 97 SNP T/C tgagtcaacagcgtgtgagt agtgtgggacccgtattcag PleI,MlyI,HinfI,TspRI chr2 AP004187 OJ1435_F07 139041 58758 58760 Plus Contig32923 2871 97 SNP T/C gtgagttagtgtgggacccg attcagggctctcttcacct FauI,AciI,BstMWI chr2 AP004187 OJ1435_F07 139041 58789 58791 Plus Contig32923 2871 97 IND 1 ctcttcacctctctctctct ttcctccccttgttcacact chr2 AP004187 OJ1435_F07 139041 58791 58793 Plus Contig32923 2871 97 IND 1 cttcacctctctctctctct cctccccttgttcacatcca chr2 AP004187 OJ1435_F07 139041 58795 58797 Plus Contig32923 2871 97 SNP C/T acctctctctctctcttcct cccttgttcacatctcattg MnlI chr2 AP004187 OJ1435_F07 139041 58903 58905 Plus Contig32923 2871 97 SNP T/C ggtggtaggctcacatgtga gggcagagggggtggcatgt Tsp45I,MaeIII chr2 AP004187 OJ1435_F07 139041 58907 58909 Plus Contig32923 2871 97 SNP C/T gtaggctcacatgtgatggg agagggggtggcatgttcat chr2 AP004187 OJ1435_F07 139041 59011 59013 Plus Contig32923 2871 97 SNP G/A cactagagaagaccaatggt aggaggacgacaattgacat HphI,BseRI chr2 AP004187 OJ1435_F07 139041 59153 59155 Plus Contig32923 2871 97 SNP G/A cattctcgctgctcctcatc ctggtgagctcccttcatcc TspRI,BsrI chr2 AP004187 OJ1435_F07 139041 59193 59195 Plus Contig32923 2871 97 SNP T/C ctcctccttcgtgtggctga gtaacggcgatgcgaatatg TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 59375 59377 Plus Contig32923 2871 97 SNP C/A tcgtgtcccgcctctaccac gctagctacctctatcctac AciI CviJI,AluI chr2 AP004187 OJ1435_F07 139041 59408 59410 Plus Contig32923 2871 97 SNP C/T tatcctacagccgttggaaa gaaagatagggaagaggggc TspDTI chr2 AP004187 OJ1435_F07 139041 59510 59512 Plus Contig32923 2871 97 SNP A/G attgatggtattggagtatt gactaggaaaaggaaggggg chr2 AP004187 OJ1435_F07 139041 59572 59574 Plus Contig32923 2871 97 SNP C/T aataacgggtgaggggagcc tgacatgttgggcgcacgct Bsp1286I,BanII chr2 AP004187 OJ1435_F07 139041 59684 59686 Plus Contig32923 2871 97 SNP C/T aattgagggacccgttgtat tgattttttttttgttcaag Hpy188I chr2 AP004187 OJ1435_F07 139041 59737 59739 Plus Contig32923 2871 97 SNP C/T cgcgctgtcaagttaaagga cttaaatgaacttattcgta Psp5II,EcoO109I,AvaII,Sau96I BstYI,AlwI,DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 59777 59782 Plus Contig32923 2871 97 IND 4 agatagatagatagatagat gggccactaagaaatgtaga chr2 AP004187 OJ1435_F07 139041 59786 59788 Plus Contig32923 2871 97 SNP A/G gatagatagatagatgggcc ctaagaaatgtagatggggg TauI,Fnu4HI,AciI chr2 AP004187 OJ1435_F07 139041 59883 59885 Plus Contig32923 2871 97 SNP C/A aaacccttctcctcctccgc gccgggaggttcatggcctc TauI,BslI,AciI,EciI BbvI,ApeKI,CviJI chr2 AP004187 OJ1435_F07 139041 60061 60063 Plus Contig32923 2871 97 SNP A/G ccgccaacgcctcctccggc gctctaggctcaagcagatc BbvI,ApeKI,AluI TauI chr2 AP004187 OJ1435_F07 139041 60642 60644 Plus Contig32923 2871 97 SNP C/A cttaaccgagctgttagaat atggaatgcagggaagcata PfeI,HinfI,NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 60787 60789 Plus Contig32923 2871 97 SNP G/A tccaaggggctggtgacgac acgacgacgaggaattcaat chr2 AP004187 OJ1435_F07 139041 71921 71923 Plus Contig31997 2933 97 SNP C/A gtcttcggttgtaaatgtta tattctacaaacttgttaaa MaeIII MseI,SspI chr2 AP004187 OJ1435_F07 139041 72064 72066 Plus Contig31997 2933 97 SNP T/C gtccaggcctggtcgtaggc agttatgcagctcatctaga BfaI BshFI chr2 AP004187 OJ1435_F07 139041 72193 72195 Plus Contig31997 2933 97 SNP G/T taataagataaaagatgaga agaagagcagcaggctacag chr2 AP004187 OJ1435_F07 139041 72211 72213 Plus Contig31997 2933 97 SNP C/T gagagaagagcagcaggcta agatttgtagccagttgcag chr2 AP004187 OJ1435_F07 139041 72507 72509 Plus Contig31997 2933 97 SNP C/A acgacatgcacgaaagagac tgcatctcatcagcatctat BspMI,BsaI NspI,NlaIII,FatI,CviAII,NsiI,BfrBI chr2 AP004187 OJ1435_F07 139041 72659 72661 Plus Contig31997 2933 97 SNP A/G accaatttcagacttagtgt atgtcgttgtcgcaccaaat chr2 AP004187 OJ1435_F07 139041 73050 73051 Plus Contig31997 2933 97 IND -5 ggagttgcatatatcttctt tttttcaattacatggcgga chr2 AP004187 OJ1435_F07 139041 73110 73112 Plus Contig31997 2933 97 SNP C/A cacacaataccacattcaca acccacgaatataccctcta TaqII chr2 AP004187 OJ1435_F07 139041 73167 73169 Plus Contig31997 2933 97 SNP C/T gacaaaaattagcggcacat acttatctcactaaatttcc chr2 AP004187 OJ1435_F07 139041 73248 73250 Plus Contig31997 2933 97 IND 1 tagaatatcgattttttttt aagttgcatgtatgattgtt chr2 AP004187 OJ1435_F07 139041 73346 73348 Plus Contig31997 2933 97 SNP A/T gtatagttattactccactt ggttgaacatggatggatgg DdeI chr2 AP004187 OJ1435_F07 139041 73455 73457 Plus Contig31997 2933 97 SNP T/A acacctgaacctgaacggag cataacctcctggtgggggt PleI,MlyI,HinfI Hin4I,BsaXI chr2 AP004187 OJ1435_F07 139041 73465 73467 Plus Contig31997 2933 97 SNP C/T ctgaacggagtcataacctc tggtgggggttgggtttggt BssKI,BseBI,BslI,ScrFI,AjnI chr2 AP004187 OJ1435_F07 139041 73668 73670 Plus Contig31997 2933 97 SNP C/T aataatatctgctactccct tgaatggcgccgttgatatt MnlI,Hpy188I chr2 AP004187 OJ1435_F07 139041 73671 73673 Plus Contig31997 2933 97 SNP A/T aatatctgctactccctctg atggcgccgttgatattttt Hpy188I chr2 AP004187 OJ1435_F07 139041 73673 74452 Plus Contig31997 2933 97 # chr2 AP004187 OJ1435_F07 139041 8483 8485 Minus Contig9992 8740 98 IND 1 aaataactaaaattcgaaat aagaaaaatatgggaagaag chr2 AP004187 OJ1435_F07 139041 8517 8519 Minus Contig9992 8740 98 SNP T/C gaagaagagtttaaggtcaa ataagaatacaatttattag Hpy8I,HincII chr2 AP004187 OJ1435_F07 139041 8662 8663 Minus Contig9992 8740 98 IND -7 aatattgaaaaaaaagcata tagaaatacaatttacaaaa chr2 AP004187 OJ1435_F07 139041 8783 8785 Minus Contig9992 8740 98 SNP A/C tttgatattaataactaaca gtatataaaatataatatga AflIII,BsaAI,TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 8937 8939 Minus Contig9992 8740 98 SNP C/T agtccatataggaatatata aatttacaaataactaaaat chr2 AP004187 OJ1435_F07 139041 8957 8959 Minus Contig9992 8740 98 SNP T/A caatttacaaataactaaaa ttgatattaaaaataattaa ApoI chr2 AP004187 OJ1435_F07 139041 9118 9120 Minus Contig9992 8740 98 SNP G/C agaaaatataatgatgctag cgcgcaatttgcacaggcca Hin6I,BssHII,HhaI BmtI,NheI,CviJI,TauI,Fnu4HI,AciI chr2 AP004187 OJ1435_F07 139041 9127 9129 Minus Contig9992 8740 98 SNP T/C aatgatgctaggcgcgcaat tgcacaggccaccatgctag Tsp509I chr2 AP004187 OJ1435_F07 139041 9131 9133 Minus Contig9992 8740 98 SNP A/G atgctaggcgcgcaatttgc caggccaccatgctagttgg CviRI BstMWI,FspI,Hin6I,HhaI,BstC8I chr2 AP004187 OJ1435_F07 139041 9133 9135 Minus Contig9992 8740 98 SNP A/G gctaggcgcgcaatttgcac ggccaccatgctagttggat Sau96I chr2 AP004187 OJ1435_F07 139041 9165 9167 Minus Contig9992 8740 98 SNP G/A tagttggatgtataacaaca tgttaagattctgctcctac TaaI,TspRI chr2 AP004187 OJ1435_F07 139041 9467 9469 Minus Contig9992 8740 98 SNP G/A tcctagagagagtgcacaag aacttttactgctctgtttt chr2 AP004187 OJ1435_F07 139041 9469 9471 Minus Contig9992 8740 98 SNP A/C ctagagagagtgcacaagga cttttactgctctgtttttg Psp5II,EcoO109I,AvaII,Sau96I chr2 AP004187 OJ1435_F07 139041 9512 9514 Minus Contig9992 8740 98 SNP A/C tcaaattacaaggtcattcg caatgaaattttgtactact TaqI chr2 AP004187 OJ1435_F07 139041 9563 9565 Minus Contig9992 8740 98 SNP T/C gttattatgtaattggagca gtgctcctatggtatccgta NspI,NlaIII,FatI,CviAII Bsp1286I,BsiHKAI,BsaAI,AcvI,TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 9585 9587 Minus Contig9992 8740 98 SNP T/A tgctcctatggtatccgtat gtttgtgagaatgtttctgt chr2 AP004187 OJ1435_F07 139041 9800 9802 Minus Contig9992 8740 98 SNP C/A ctcggtttagattcgtagct taagatatatcgcatatgca DdeI chr2 AP004187 OJ1435_F07 139041 9856 9860 Minus Contig9992 8740 98 IND 3 ggatattgggatggaggtag cgcttttaagtgtgcagctt chr2 AP004187 OJ1435_F07 139041 9860 9862 Minus Contig9992 8740 98 SNP G/A attgggatggaggtagtagc cttttaagtgtgcagcttga HaeII,Eco47III,Hin6I,HhaI chr2 AP004187 OJ1435_F07 139041 10186 10188 Minus Contig9992 8740 98 SNP T/A cagcataggacaaaatatat ggtagatatatggtctgata chr2 AP004187 OJ1435_F07 139041 11065 11067 Minus Contig9992 8740 98 SNP A/G agaaaggtttgtgacaagta tctgatctcaagtgtcttat AhdI chr2 AP004187 OJ1435_F07 139041 11249 11251 Minus Contig9992 8740 98 SNP A/G aactccgatggtgatacatc ttcaatgatctttcagtaac chr2 AP004187 OJ1435_F07 139041 11342 11344 Minus Contig9992 8740 98 SNP A/C tattttcgaacttcaaaact tctctttcttcatgtttcaa chr2 AP004187 OJ1435_F07 139041 11412 11414 Minus Contig9992 8740 98 IND 1 ttcttaaggtatgaagcttg aggttgtgtgattggttgtt chr2 AP004187 OJ1435_F07 139041 11426 11428 Minus Contig9992 8740 98 SNP G/T agcttggaggttgtgtgatt gttgttatggagctgagctg chr2 AP004187 OJ1435_F07 139041 11675 11677 Minus Contig9992 8740 98 IND 1 tctcttgcataatttttttt ctataaatgattccaggaat chr2 AP004187 OJ1435_F07 139041 12229 12231 Minus Contig9992 8740 98 SNP G/A gaaacttggtcaaaccaaac cataatagatcatcaaacca chr2 AP004187 OJ1435_F07 139041 12695 12697 Minus Contig9992 8740 98 SNP G/T tggatgcttctgcaggggaa ctcaccaagaaataccctgc BstMWI,CviJI,AluI PfeI,HinfI chr2 AP004187 OJ1435_F07 139041 13532 13534 Minus Contig9992 8740 98 SNP G/A cttggaaggtactactctcg cctttccttgatctcttctt CviJI,BshFI Hpy188III,TaqI chr2 AP004187 OJ1435_F07 139041 13791 13793 Minus Contig9992 8740 98 SNP G/T ttgctaaaaagttacaaatt aaggaactatcggccaaaag ApoI,MseI chr2 AP004187 OJ1435_F07 139041 14226 14228 Minus Contig9992 8740 98 SNP C/G cttgaggagcacattaacta tctgaaatcttactgctgaa SpeI,BfaI chr2 AP004187 OJ1435_F07 139041 14252 14254 Minus Contig9992 8740 98 SNP A/G aatcttactgctgaaacgtg aaagaggtctttttacttag chr2 AP004187 OJ1435_F07 139041 14573 14575 Minus Contig9992 8740 98 IND 1 aatagaatagcacacaactt cacacttgaaactcatgcag chr2 AP004187 OJ1435_F07 139041 14655 14657 Minus Contig9992 8740 98 SNP G/A tgatccagattaactagatg cacccccgcgctttgctata BspLI,BanI,BccI chr2 AP004187 OJ1435_F07 139041 14658 14659 Minus Contig9992 8740 98 IND -1 tccagattaactagatggca cccccgcgctttgctataga chr2 AP004187 OJ1435_F07 139041 14685 14687 Minus Contig9992 8740 98 SNP A/G gctttgctatagaatacata ataaaaatatcctaaatgtt chr2 AP004187 OJ1435_F07 139041 14738 14740 Minus Contig9992 8740 98 SNP A/G gagggatatatgtgttaaat ttgaaaaaaaattgatagat SspI chr2 AP004187 OJ1435_F07 139041 14788 14790 Minus Contig9992 8740 98 SNP T/C ttaaaatattgtgaaaatga atgagaaatgattatttggt NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 15144 15146 Minus Contig9992 8740 98 SNP T/C gacttgtctttcagattttc acaacctaaacccaaatggt chr2 AP004187 OJ1435_F07 139041 15215 15217 Minus Contig9992 8740 98 SNP T/C cacattttactagtctgaaa cttactgctgaaacatgaaa chr2 AP004187 OJ1435_F07 139041 15720 15722 Minus Contig9992 8740 98 SNP C/A gtaagtagagtgctctctca cttttcttcactttatgggc chr2 AP004187 OJ1435_F07 139041 15967 15968 Minus Contig9992 8740 98 IND -1 cgagagccatcgcttttttc attttttttttggaggaata chr2 AP004187 OJ1435_F07 139041 15967 15969 Minus Contig9992 8740 98 SNP A/T aaagagccatcgcttttttc ttttttttttggaggaatat chr2 AP004187 OJ1435_F07 139041 16096 16098 Minus Contig9992 8740 98 SNP T/C acagcaagaagctagcacat acatacatacatatattgtt chr2 AP004187 OJ1435_F07 139041 16499 16501 Minus Contig9992 8740 98 IND 1 gcctaagatgacatgggaga atttgtgtacctcttcttag chr2 AP004187 OJ1435_F07 139041 16503 16505 Minus Contig9992 8740 98 SNP T/C aagatgacatgggagatatt gtgtacctcttcttcagtgc chr2 AP004187 OJ1435_F07 139041 16506 16508 Minus Contig9992 8740 98 SNP G/C atgacatgggagatatttgt tacctcttcttcagtgcatt Csp6I,RsaI AccI chr2 AP004187 OJ1435_F07 139041 68162 68163 Minus Contig45553 1688 98 IND -1 ttgtgaatccctttgtaggt ttgttctataaatcttccca chr2 AP004187 OJ1435_F07 139041 68162 68164 Minus Contig45553 1688 98 SNP T/C tagtgaatccctttgtaggt tgttctataaatcttcccat chr2 AP004187 OJ1435_F07 139041 69025 69027 Minus Contig45553 1688 98 SNP T/G aacgccgcgtaccccatgca ccgcacagcaggtagaacac NsiI,BfrBI,SfaNI BbvI,ApeKI,CviJI,TauI chr2 AP004187 OJ1435_F07 139041 69382 69384 Minus Contig45553 1688 98 IND 1 cagacttggtcgaagtcggg atctgggagaagaacacctg chr2 AP004187 OJ1435_F07 139041 74652 74654 Minus Contig15209 6609 98 IND 1 cgcgtaggcagctctcgcat ccgttcaattccggtcggcg chr2 AP004187 OJ1435_F07 139041 74675 74677 Minus Contig15209 6609 98 IND 1 gttcaattccggtcggcgta cacatggcgagggcgaaggc chr2 AP004187 OJ1435_F07 139041 74678 74680 Minus Contig15209 6609 98 SNP C/G caattccggtcggcgtagca atggcgagggcgaaggcctc NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 74828 74829 Minus Contig15209 6609 98 IND -1 agatggccaacacaaaacca aatcacattcagttttcatc chr2 AP004187 OJ1435_F07 139041 74828 74830 Minus Contig15209 6609 98 SNP A/G tcatggccaacacaaaacca atcacattcagttttcatct DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 74872 74874 Minus Contig15209 6609 98 SNP A/G gggactgcaaagttaaagcc cacgttaaccacacattgac AflIII TauI,Fnu4HI,AciI chr2 AP004187 OJ1435_F07 139041 74956 74965 Minus Contig15209 6609 98 IND 8 gctgtcggtggtgtagttgc gccgtcgagcagtacaacgg chr2 AP004187 OJ1435_F07 139041 75002 75004 Minus Contig15209 6609 98 SNP G/T ggcggctgccgagcttgaac tggcgacgacggcgtctacc TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 75103 75105 Minus Contig15209 6609 98 SNP T/C cgggctgctccgccggtcgg cgctccggcccgcgccgtcg EaeI,EagI,SfiI,CviJI,BshFI,TauI,Fnu4HI,BstMWI,BglI,AciI,BsrBI chr2 AP004187 OJ1435_F07 139041 75298 75300 Minus Contig15209 6609 98 SNP G/T gccgaacctcctcttctccc gctcgccccgtcgacttcct BssKI,ScrFI,NciI,MspI,CviJI chr2 AP004187 OJ1435_F07 139041 75346 75347 Minus Contig15209 6609 98 IND -1 cgccggctagcctgcctacc agatgaggagaaaactgaag chr2 AP004187 OJ1435_F07 139041 75369 75370 Minus Contig15209 6609 98 IND -1 tgaggagaaaactgatagaa gaggaagggatagatgacgt chr2 AP004187 OJ1435_F07 139041 75401 75409 Minus Contig15209 6609 98 IND 7 gatgacgtggcatcctaaca ctcacgtgggtcccacgcag chr2 AP004187 OJ1435_F07 139041 75409 75414 Minus Contig15209 6609 98 IND 4 ggcatcctaacatgtggggc gtgggtcccacgcagactcg chr2 AP004187 OJ1435_F07 139041 75420 75422 Minus Contig15209 6609 98 SNP C/T atgtggggctcacgtgggtc cacgcagactcggccaccat SanDI,Psp5II,EcoO109I,AvaII,Sau96I BsaI,BsmAI chr2 AP004187 OJ1435_F07 139041 75447 75449 Minus Contig15209 6609 98 SNP C/T gactcggccaccatgtcgga aaaactggggttaaaactac chr2 AP004187 OJ1435_F07 139041 75454 75456 Minus Contig15209 6609 98 SNP G/A ccaccatgtcggacaaaact gggttaaaactacgagggac BsrI,BmrI BfaI chr2 AP004187 OJ1435_F07 139041 75468 75470 Minus Contig15209 6609 98 IND 1 aaaactggggttaaaactac agggacctaaagcgaacgtt chr2 AP004187 OJ1435_F07 139041 75470 75472 Minus Contig15209 6609 98 SNP G/A aactggggttaaaactacga ggacctaaagcgaacgattt BspLI,BsmFI,BslFI chr2 AP004187 OJ1435_F07 139041 75507 75509 Minus Contig15209 6609 98 SNP C/T attttgttactcgagggatg ccggtatctggttttgcaat SfaNI,BssKI,ScrFI,NciI BsaWI chr2 AP004187 OJ1435_F07 139041 75535 75537 Minus Contig15209 6609 98 SNP C/T ctggttttgcaattggggga gattttgtatcttgatgaca BsmFI,BslFI FokI,BseGI chr2 AP004187 OJ1435_F07 139041 75572 75574 Minus Contig15209 6609 98 SNP A/G gacaagttgagggatcttgg tgtactttttccgaaggaaa FokI,BseGI Hpy8I chr2 AP004187 OJ1435_F07 139041 75752 75754 Minus Contig15209 6609 98 SNP C/T aaaattccgaaaaataaaat agataatgtaattaatcatg Hpy188I Tsp509I chr2 AP004187 OJ1435_F07 139041 75796 75798 Minus Contig15209 6609 98 SNP C/T aatttaataaaaattagttc aatatttggaaaattttatt BslI,PflMI chr2 AP004187 OJ1435_F07 139041 75822 75824 Minus Contig15209 6609 98 SNP T/C ttggaaaattttattaccca atttaccttgattttcatga chr2 AP004187 OJ1435_F07 139041 75955 75957 Minus Contig15209 6609 98 SNP T/G ttatatgaaggatggtgaaa ttgtattttaattaattaca ApoI,Tsp509I chr2 AP004187 OJ1435_F07 139041 75988 75991 Minus Contig15209 6609 98 IND 2 taattacataatgtaaatct ctcaactttttcttaatgtt chr2 AP004187 OJ1435_F07 139041 76007 76009 Minus Contig15209 6609 98 SNP G/T tttctcaactttttcttaat ttctcgtgttttatttccgt Tsp509I chr2 AP004187 OJ1435_F07 139041 76023 76025 Minus Contig15209 6609 98 SNP T/C taatgttctcgtgttttatt ccgttgtaacgcacggtttt chr2 AP004187 OJ1435_F07 139041 76032 76034 Minus Contig15209 6609 98 IND 1 cgtgttttatttccgttgta cgcacggtttttttttttgt chr2 AP004187 OJ1435_F07 139041 76040 76042 Minus Contig15209 6609 98 IND 1 atttccgttgtaacgcacgg ttttttttttgtctagtaag chr2 AP004187 OJ1435_F07 139041 76087 76089 Minus Contig15209 6609 98 SNP T/C gatcggttaaaagcctaaaa aaagaggatctaaatgatta chr2 AP004187 OJ1435_F07 139041 76341 76343 Minus Contig15209 6609 98 SNP C/A ctcgaatcgaatccttcctt ctaccataccaataccaata chr2 AP004187 OJ1435_F07 139041 77448 77462 Minus Contig15209 6609 98 IND 13 tacttctagtggaggagtag ctccctgtttaaattagttt chr2 AP004187 OJ1435_F07 139041 77519 77531 Minus Contig15209 6609 98 IND 11 ctgctctgctctgcttttgt ggtttgaccgcgcgagtgga chr2 AP004187 OJ1435_F07 139041 77654 77656 Minus Contig15209 6609 98 SNP C/G ataaaattgaatcgattgta tatagtactccagtagtagt TatI,Csp6I,RsaI,SfcI chr2 AP004187 OJ1435_F07 139041 77677 77679 Minus Contig15209 6609 98 SNP T/G tagtactccagtagtagtag gtagtattaaaatccatcca chr2 AP004187 OJ1435_F07 139041 81112 81114 Minus Contig15209 6609 98 SNP A/G cgtcatgctagattagatta cttatacatctaccaccctg MseI CviJI,AluI chr2 AP004187 OJ1435_F07 139041 112196 112198 Plus Contig23196 4326 98 IND 1 aagtatattttacaatgaat aaatgatataaaaagaataa chr2 AP004187 OJ1435_F07 139041 112221 112223 Plus Contig23196 4326 98 SNP T/G gatataaaaagaataaataa tacttaaatttttttaataa Tsp509I TatI,ScaI,Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 112224 112226 Plus Contig23196 4326 98 IND 1 ataaaaagaataaataatta ttaaatttttttaataagac chr2 AP004187 OJ1435_F07 139041 112225 112227 Plus Contig23196 4326 98 SNP T/G taaaaagaataaataattac taaatttttttaataagacg MseI SnaBI,BsaAI,TaiI,MaeII chr2 AP004187 OJ1435_F07 139041 112757 112759 Plus Contig23196 4326 98 SNP A/T gttctgttatgtattttttt aaaaaaactcaataataata chr2 AP004187 OJ1435_F07 139041 113422 113424 Plus Contig23196 4326 98 SNP G/C gattaaaatagccttcaccc ttgcaacacacgggcatttt chr2 AP004187 OJ1435_F07 139041 114428 114429 Plus Contig23196 4326 98 IND -1 gttttcgatgtgatgtgata tgataaaaagttgagaatac chr2 AP004187 OJ1435_F07 139041 114571 114573 Plus Contig23196 4326 98 SNP G/A tcacattttagtgtaacttt gatttctgtgttcaatattt chr2 AP004187 OJ1435_F07 139041 115009 115010 Plus Contig23196 4326 98 IND -2 cctctgtcaaaaaaaaaaaa tttaaagggttttagataaa chr2 AP004187 OJ1435_F07 139041 26021 26986 Plus Contig8134 9329 99 # chr2 AP004187 OJ1435_F07 139041 27055 27057 Plus Contig8134 9329 99 SNP A/T ttctatcggttcaacatggt aatcggttatattaatttta MseI chr2 AP004187 OJ1435_F07 139041 28416 28418 Plus Contig8134 9329 99 SNP G/A acagtacctgaaagaagaac atatataagcgcacgtgtgg chr2 AP004187 OJ1435_F07 139041 28711 28713 Plus Contig8134 9329 99 SNP A/G tttcttgtccacaaggagca ctgggtgatagaatcaacat BsrI,BmrI Fnu4HI,BbvI,ApeKI,PvuII,MspA1I,CviJI,AluI chr2 AP004187 OJ1435_F07 139041 29258 29260 Plus Contig8134 9329 99 SNP A/G gcacactatacaccactcat tcaaaatcattagacttagc NlaIII,FatI,CviAII chr2 AP004187 OJ1435_F07 139041 30193 30195 Plus Contig8134 9329 99 SNP T/G agcatcatgctagtagaaat attagaatgtacaactcact Tsp509I chr2 AP004187 OJ1435_F07 139041 30507 30508 Plus Contig8134 9329 99 IND -1 ggaagaagaaactctgattt aaaaaaaaaaatgcttgaaa chr2 AP004187 OJ1435_F07 139041 30507 30509 Plus Contig8134 9329 99 SNP A/T ggaagaagaaactctgattt aaaaaaaaaatgcttgaaag chr2 AP004187 OJ1435_F07 139041 30610 30612 Plus Contig8134 9329 99 SNP C/T actttgcaaggaaaagcagt atactagtacaggcatatat chr2 AP004187 OJ1435_F07 139041 30834 30835 Plus Contig8134 9329 99 IND -2 aaaagggagatgattttttt taaaaaaaaaaaacaagttt chr2 AP004187 OJ1435_F07 139041 30834 30836 Plus Contig8134 9329 99 SNP T/A aaaagggagatgattttttt aaaaaaaaaaaacaagttct chr2 AP004187 OJ1435_F07 139041 31584 31589 Plus Contig8134 9329 99 IND 4 tcaccgcgtgattttttttt ggaacggttttcttctcttt chr2 AP004187 OJ1435_F07 139041 31606 31608 Plus Contig8134 9329 99 SNP T/C ttggaacggttttcttctct ttttttttctgtttttcgtt chr2 AP004187 OJ1435_F07 139041 31678 31680 Plus Contig8134 9329 99 IND 1 acggtttccttttttttttt ctttccgtatcttacgattc chr2 AP004187 OJ1435_F07 139041 31736 31738 Plus Contig8134 9329 99 SNP C/T gttttttctttacgtattat tttcgttttataatatatat chr2 AP004187 OJ1435_F07 139041 31762 31773 Plus Contig8134 9329 99 IND 10 ttttataatatatatatata tatatatgcaaactttatat chr2 AP004187 OJ1435_F07 139041 31795 31797 Plus Contig8134 9329 99 SNP A/T atatgcaaactttatatatg acaaatacaaactttgcata TspDTI TatI,Bsp1407I,Csp6I,RsaI chr2 AP004187 OJ1435_F07 139041 31890 31892 Plus Contig8134 9329 99 SNP G/A tttgggggttttatacgtgt tacacaaacttggtaaacat TatI,Bsp1407I,Hpy8I,Csp6I,RsaI BstZ17I,AccI chr2 AP004187 OJ1435_F07 139041 31934 31936 Plus Contig8134 9329 99 IND 1 tacaaagtttatatatatat tattttttcgtttcttatac chr2 AP004187 OJ1435_F07 139041 31936 31938 Plus Contig8134 9329 99 SNP A/T caaagtttatatatatatat ttttttcgtttcttatacgt chr2 AP004187 OJ1435_F07 139041 31954 31956 Plus Contig8134 9329 99 SNP C/T atattttttcgtttcttata gtacacacaaactttttata SnaBI,BsaAI,TaiI,MaeII TatI,Bsp1407I chr2 AP004187 OJ1435_F07 139041 32064 32066 Plus Contig8134 9329 99 SNP T/C acacgtataaattttgtata ataaatataaaatttataca Hpy8I,BstZ17I,AccI chr2 AP004187 OJ1435_F07 139041 32303 32305 Plus Contig8134 9329 99 SNP A/T atgtaaatcgacttctttta ggtttgggaagcagtttgtg MseI chr2 AP004187 OJ1435_F07 139041 32407 32409 Plus Contig8134 9329 99 SNP C/T ttattttctagtacatccat ccataatataaaaactttta BccI chr2 AP004187 OJ1435_F07 139041 32430 32432 Plus Contig8134 9329 99 SNP G/T ataatataaaaacttttaag ttggacacaagtataaagaa chr2 AP004187 OJ1435_F07 139041 32433 32435 Plus Contig8134 9329 99 SNP G/A atataaaaacttttaaggtt gacacaagtataaagaaagt chr2 AP004187 OJ1435_F07 139041 32647 32649 Plus Contig8134 9329 99 SNP G/T taaatcgggcactctttgtt aagcttataagggagcttat MseI chr2 AP004187 OJ1435_F07 139041 32714 32716 Plus Contig8134 9329 99 SNP T/C aaataaatattttttttgtc tttaaaagctataagccacc chr2 AP004187 OJ1435_F07 139041 32820 32822 Plus Contig8134 9329 99 SNP A/G tgacttcattattaaactta gattttaaatgcattggctt SmlI,AflII,MseI DdeI chr2 AP004187 OJ1435_F07 139041 32850 32852 Plus Contig8134 9329 99 SNP T/C tgcattggcttataaaataa actacatttgttttttaaca chr2 AP004187 OJ1435_F07 139041 32900 32902 Plus Contig8134 9329 99 SNP T/A attgactttttgtcatacgt tgatcatttgtcttatttta MslI,SnaBI,BsaAI chr2 AP004187 OJ1435_F07 139041 33214 33216 Plus Contig8134 9329 99 SNP C/T gtgcgttgcaacgggaaatg tatatatcaatttcaaatta chr2 AP004187 OJ1435_F07 139041 33577 33579 Plus Contig8134 9329 99 SNP T/C ccgctagggtgttgctttca actcattttgttggtacatc TspDTI chr2 AP004187 OJ1435_F07 139041 33619 33620 Plus Contig8134 9329 99 IND -1 gtagatttagcaaaaaaaaa ttgccttagctcgtcaccat chr2 AP004187 OJ1435_F07 139041 33689 33691 Plus Contig8134 9329 99 SNP T/C aatatagttacaagcccgcg taacgctatggtgacgattt Hpy8I,HpaI,HincII,MseI Hin6I,HhaI chr2 AP004187 OJ1435_F07 139041 34520 34522 Plus Contig8134 9329 99 SNP C/T tttcagacacgtttggtatt acttccaaatatgagagtat chr2 AP004187 OJ1435_F07 139041 34669 34671 Plus Contig8134 9329 99 SNP G/A taaaaaaatgtgtgcgtgtt agaagtaaaattataaaggt MseI chr2 AP004187 OJ1435_F07 139041 34751 34754 Plus Contig8134 9329 99 IND 2 aatatctgatcctttttttt cataaactcactaatacgta chr2 AP004187 OJ1435_F07 139041 34769 34771 Plus Contig8134 9329 99 SNP C/T ttttcataaactcactaata gtatgagctagctttgattg SnaBI,BsaAI,TaiI,MaeII MslI chr2 AP004187 OJ1435_F07 139041 34864 34865 Plus Contig8134 9329 99 IND -15 ttagagagagagagagagag ggtggggtggggaaggggga chr2 AP004187 OJ1435_F07 139041 35050 35052 Plus Contig8134 9329 99 SNP A/G agaaatatatagtattttcc agaattgcccatcctctgct Hpy188I chr2 AP004187 OJ1435_F07 139041 35416 35418 Plus Contig8134 9329 99 SNP C/T tctactccatagtaatgaca cctgaaacaaaacagataca Hpy188III chr2 AP004187 OJ1435_F07 139041 35425 35427 Plus Contig8134 9329 99 IND 1 tagtaatgacaccctgaaac aaacagatacaagaacacca chr2 AP004187 OJ1435_F07 139041 35539 35541 Plus Contig8134 9329 99 SNP A/G caagcatgacttggagtgaa aaagctgctaacaacatagg MboII chr2 AP004187 OJ1435_F07 139041 35619 35621 Plus Contig8134 9329 99 SNP T/A agcagcaagcatgttggagt tgcaacaacaatcatgaagc chr2 AP004187 OJ1435_F07 139041 35624 35626 Plus Contig8134 9329 99 SNP A/G caagcatgttggagtttgca caacaatcatgaagcaggat Fnu4HI,BbvI,ApeKI chr2 AP004187 OJ1435_F07 139041 83258 83260 Plus Contig7179 10739 99 SNP G/A gacttcctgttaattattcc attggatgaaaacttcctaa Hpy188I MunI,Tsp509I chr2 AP004187 OJ1435_F07 139041 83901 83903 Plus Contig7179 10739 99 SNP T/A tgatcaatggtccctccccc ataatatagattagtagata chr2 AP004187 OJ1435_F07 139041 85677 85679 Plus Contig7179 10739 99 SNP A/G ttatgttggtcataacagca ttactcattattttgaggaa Tsp509I MaeIII chr2 AP004187 OJ1435_F07 139041 93356 93358 Plus Contig7179 10739 99 SNP C/G cgtcaccgcttgtatggaaa gcgcagccgcaagcgcgccg ThaI chr2 AP004187 OJ1435_F07 139041 97351 97353 Minus Contig1692 18129 99 SNP A/G tgaatctgtgatgccctcgc ttctagacgccagcgccggc ThaI chr2 AP004187 OJ1435_F07 139041 102076 102078 Minus Contig1692 18129 99 SNP A/T atgctctctctctctctctc cacacacacacacacacacg chr2 AP004187 OJ1435_F07 139041 103352 103355 Minus Contig1692 18129 99 IND 2 tgcccccccccccccccccc aaggagcgaaaagcaaagat chr2 AP004187 OJ1435_F07 139041 104954 104956 Minus Contig1692 18129 99 SNP T/A tgttcgtcttatttgatttt ttttaaaaaaaattaaaaac chr2 AP004187 OJ1435_F07 139041 104959 104961 Minus Contig1692 18129 99 SNP A/C gtcttatttgattttttttt aaaaaaattaaaaacataag DraI,MseI chr2 AP004187 OJ1435_F07 139041 105006 105008 Minus Contig1692 18129 99 SNP T/G gtaaagtactattcatgttt atcatctcatagcaataaaa BclI,DpnI,BstKTI,BfuCI chr2 AP004187 OJ1435_F07 139041 106649 106652 Minus Contig1692 18129 99 IND 2 atggtggggtgggggggggg tgtggttagtgaaggaagga chr2 AP004187 OJ1435_F07 139041 107941 107944 Minus Contig1692 18129 99 IND 2 ctctctctctctctctctct ttacttttactactgctgct chr2 AP005519 P0402F12_51C04 5166 226 228 Minus Contig18562 5563 95 SNP T/C cataacacaaatccaacaga agactagccaaaattttctt chr2 AP005519 P0402F12_51C04 5166 373 206 Minus Contig18562 5563 95 # chr2 AP005519 P0402F12_51C04 5166 963 965 Minus Contig18562 5563 95 SNP C/T aattcaattcatgcaatgaa aatattacagtgatatttca chr2 AP005519 P0402F12_51C04 5166 1096 1098 Minus Contig18562 5563 95 SNP T/C accgaagctccacaatcatt ccaccagcagaacttaatga chr2 AP005519 P0402F12_51C04 5166 1389 1391 Minus Contig18562 5563 95 SNP A/T agtgaaaatagaggagcaga taaaactttgtgaaacaagt MseI chr2 AP005519 P0402F12_51C04 5166 1481 1483 Minus Contig18562 5563 95 SNP G/T gccacaattcctcagcctca gtatgggtaactttggaagt AxyI,DdeI,BspCNI,BseMII NlaIII,FatI,CviAII chr2 AP005519 P0402F12_51C04 5166 2280 2282 Minus Contig18562 5563 95 SNP C/T aatgtgctaggtcaacacta tcaatatctctaagaatttc chr2 AP005519 P0402F12_51C04 5166 2425 2427 Minus Contig18562 5563 95 SNP A/G agcaactccctgtgagccag ctccttgggaccttcatctt HinfI BssKI,BseBI,ScrFI,AjnI,CviJI,BspLI chr2 AP005519 P0402F12_51C04 5166 2844 2846 Minus Contig18562 5563 95 SNP G/A ccaaaaatatatatacgcat tttacatatcatcggaggag NspI,NlaIII,FatI,CviAII,Hpy8I chr2 AP005519 P0402F12_51C04 5166 3292 3294 Minus Contig18562 5563 95 SNP A/C tacccttcaataggttaatg ctggtatttaacgtttaccg BsrI BssKI,BseBI,ScrFI,AjnI chr2 AP005519 P0402F12_51C04 5166 3369 3371 Minus Contig18562 5563 95 SNP A/G ctatggcttaccatgtcccc ccgccgccttaacaaacagt FauI,AciI,TauI,Fnu4HI chr2 AP005519 P0402F12_51C04 5166 3593 3595 Minus Contig18562 5563 95 SNP A/G gaaaaaaaataaatttcaac ataagtggggtcatgacttt chr2 AP005519 P0402F12_51C04 5166 3688 3689 Minus Contig18562 5563 95 IND -1 agttcatgtgaaattgtcaa gtaatctataaatttctatc chr2 AP005519 P0402F12_51C04 5166 3750 3752 Minus Contig18562 5563 95 SNP T/C gctgcccgataatcacaatg gagtcatgcgacttcactca DraIII BstMWI chr2 AP005519 P0402F12_51C04 5166 4094 4096 Minus Contig18562 5563 95 SNP T/G acaggaaggtgggaaggttc ggggagacttgcctgcttca chr2 AP005519 P0402F12_51C04 5166 4296 4297 Minus Contig18562 5563 95 IND -3 ctcttcttcttcttcttctt gctgctgtcgttgtcggtgg chr2 AP005519 P0402F12_51C04 5166 4746 4748 Minus Contig18562 5563 95 SNP A/T actgtagcttccttacgcac actgtagcatacgtgcaggc chr2 AP005519 P0402F12_51C04 5166 4755 4757 Minus Contig18562 5563 95 SNP A/G tccttacgcacaactgtagc tacgtgcaggcccgttagaa SunI,Csp6I,RsaI chr2 AP005519 P0402F12_51C04 5166 4853 4855 Minus Contig18562 5563 95 SNP G/C caaaactagggtgacgcctc gctcgaattttttttattta BsaJI,CviJI AciI,BsrBI chr2 AP004049 OJ1212_C06 112345 21803 21805 Plus Contig4761 12729 74 SNP G/C aatgcccgtgcgttgcaaac ggtgaaagttactttaatct BsrFI,BsaWI,PinAI,MspI chr2 AP004049 OJ1212_C06 112345 21901 21903 Plus Contig4761 12729 74 SNP C/T tatactttgggtctgtttgg acagctctagctccagcttc Csp6I,RsaI chr2 AP004049 OJ1212_C06 112345 21906 21908 Plus Contig4761 12729 74 SNP C/T tttgggtctgtttggcacag tctagctccagcttcacccc CviJI,AluI TaaI chr2 AP004049 OJ1212_C06 112345 21909 21911 Plus Contig4761 12729 74 SNP T/C gggtctgtttggcacagctc agctccagcttcacccctcc BfaI chr2 AP004049 OJ1212_C06 112345 21915 21917 Plus Contig4761 12729 74 SNP C/T gtttggcacagctctagctc agcttcacccctcctggagc BfaI chr2 AP004049 OJ1212_C06 112345 21931 21933 Plus Contig4761 12729 74 SNP G/A gctccagcttcacccctcct gagctggagctcagccaatc PfoI,BssKI,BseBI,ScrFI,AjnI,Eco57MI,BpmI BfaI chr2 AP004049 OJ1212_C06 112345 21960 21962 Plus Contig4761 12729 74 SNP T/C gctcagccaatcagtttcag tccaccaaaattgggagtgg CviJI,AluI chr2 AP004049 OJ1212_C06 112345 21966 21968 Plus Contig4761 12729 74 SNP C/T ccaatcagtttcagttccac aaaattgggagtggagttgg BslI chr2 AP004049 OJ1212_C06 112345 21973 21975 Plus Contig4761 12729 74 SNP G/T gtttcagttccaccaaaatt ggagtggagttgggtggagc PflMI,ApoI chr2 AP004049 OJ1212_C06 112345 21977 21979 Plus Contig4761 12729 74 SNP G/A cagttccaccaaaattggga tggagttgggtggagctctc chr2 AP004049 OJ1212_C06 112345 22191 22193 Plus Contig4761 12729 74 SNP C/T cgagtttttttaagagattt ttatacaactcattctatat chr2 AP004049 OJ1212_C06 112345 22214 22216 Plus Contig4761 12729 74 SNP T/C atacaactcattctatattt cgaaagcgaatggacctaaa NspV,TaqI Hpy188I chr2 AP004049 OJ1212_C06 112345 22262 22264 Plus Contig4761 12729 74 SNP T/C tcaaatacggatatgtattt caaaataaaacgaacttaaa chr2 AP004049 OJ1212_C06 112345 22269 22270 Plus Contig4761 12729 74 IND -1 cggatatgtattttcaaaat aaaacgaacttaaaaaccaa chr2 AP004049 OJ1212_C06 112345 22289 22291 Plus Contig4761 12729 74 SNP C/G aaaacgaacttaaaaaccaa tcatatacggatgacttacc chr2 AP004049 OJ1212_C06 112345 22428 22430 Plus Contig4761 12729 74 SNP T/G ataaatattgtcatggtacg ctatcacgaagacttaatag TaiI,MaeII BceAI,CviJI chr2 AP004049 OJ1212_C06 112345 22462 22466 Plus Contig4761 12729 74 IND 3 ttaatagtaaccacctttct attcctgttaatattgtggt chr2 AP004049 OJ1212_C06 112345 22469 22471 Plus Contig4761 12729 74 SNP C/A taaccacctttcttctattc tgttaatattgtggtaacgg NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 22484 22486 Plus Contig4761 12729 74 SNP T/C tattcctgttaatattgtgg aacggctttcccacgcaaga MaeIII chr2 AP004049 OJ1212_C06 112345 22671 22673 Plus Contig4761 12729 74 IND 1 aattcagttgtcattttttt cctttattatgcattattat chr2 AP004049 OJ1212_C06 112345 22724 22726 Plus Contig4761 12729 74 SNP A/G atttcgtctcttccatctct tatatttctccctcattttc chr2 AP004049 OJ1212_C06 112345 22836 22837 Plus Contig4761 12729 74 IND -2 tagtaacttctatctatata gttagaaattgttatatttt chr2 AP004049 OJ1212_C06 112345 22858 22860 Plus Contig4761 12729 74 SNP G/A tagaaattgttatattttgg acgaagatagtagcatatac BsmFI,BslFI chr2 AP004049 OJ1212_C06 112345 23160 23162 Plus Contig4761 12729 74 SNP C/T atagcctggttataattcta agccgactgcactatctttt chr2 AP004049 OJ1212_C06 112345 23255 23257 Plus Contig4761 12729 74 SNP G/A atgtgtcacattcagtccta atttttcttttataagatgg BfaI ApoI,Tsp509I chr2 AP004049 OJ1212_C06 112345 23400 23402 Plus Contig4761 12729 74 SNP G/A tagggaatttcaaaactccg ctaaattttgtccgagacgt MspI,CviJI Hpy188I chr2 AP004049 OJ1212_C06 112345 23412 23414 Plus Contig4761 12729 74 SNP C/T aaactccggctaaattttgt cgagacgtcaacaatttatg Hpy188I TaqI,Hpy188III chr2 AP004049 OJ1212_C06 112345 23464 23466 Plus Contig4761 12729 74 SNP C/T tatatgtaagctatctatta tccctccgtcccataaaaaa chr2 AP004049 OJ1212_C06 112345 23471 23473 Plus Contig4761 12729 74 SNP C/T aagctatctattactccctc gtcccataaaaaacctagta chr2 AP004049 OJ1212_C06 112345 23491 23493 Plus Contig4761 12729 74 SNP A/T cgtcccataaaaaacctagt ctggatgtgacatatctttg TatI,ScaI,Csp6I,RsaI,BsrI Hpy188III chr2 AP004049 OJ1212_C06 112345 23504 23506 Plus Contig4761 12729 74 SNP T/C acctagtactggatgtgaca atctttgtacaatgaatctg chr2 AP004049 OJ1212_C06 112345 23508 23510 Plus Contig4761 12729 74 SNP T/C agtactggatgtgacatatc ttgtacaatgaatctggaca chr2 AP004049 OJ1212_C06 112345 23554 23556 Plus Contig4761 12729 74 SNP G/T actaagatgtgccacatcca tcctagattcggtttttttg chr2 AP004049 OJ1212_C06 112345 23575 23578 Plus Contig4761 12729 74 IND 2 tcctagattcggtttttttg gtacggagggagtacatctg chr2 AP004049 OJ1212_C06 112345 23599 23601 Plus Contig4761 12729 74 SNP C/T acggagggagtacatctgat agcagaggtcatctttttct BclI,DpnI,BstKTI,BfuCI chr2 AP004049 OJ1212_C06 112345 23975 23977 Plus Contig4761 12729 74 IND 1 aagtagatgaagaaaaaaaa tgcatgttctactccatccc chr2 AP004049 OJ1212_C06 112345 23997 23999 Plus Contig4761 12729 74 SNP T/C gcatgttctactccatccca gatatcaaattcgtctacgg NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 24217 24219 Plus Contig4761 12729 74 SNP A/G actgttgcattcatcgactc gatggaaaataatcctacag DdeI,BspCNI,BseMII FokI,BseGI chr2 AP004049 OJ1212_C06 112345 24758 24760 Plus Contig4761 12729 74 SNP T/G ttacttataaagtttgaaaa attccataaaaggcgagtgt SspI PfeI,HinfI chr2 AP004049 OJ1212_C06 112345 24803 24805 Plus Contig4761 12729 74 SNP T/C aattgtatcataattgaagt cattccttaaaatgaacaaa chr2 AP004049 OJ1212_C06 112345 24958 24960 Plus Contig4761 12729 74 SNP C/T tgattaaggaataaggattg tggtttttctttcaacttta chr2 AP004049 OJ1212_C06 112345 25047 25049 Plus Contig4761 12729 74 SNP C/T tgctaagctattcataaaga tgggtatccatcttcaaata BsrI,BmrI chr2 AP004049 OJ1212_C06 112345 25236 25241 Plus Contig4761 12729 74 IND 4 cacacacacacacacaaaaa ctgatagtagtacgcaatat chr2 AP004049 OJ1212_C06 112345 25426 25428 Plus Contig4761 12729 74 SNP G/A taaactagcaatgtgtagtc tagaaagaaaacggttacat chr2 AP004049 OJ1212_C06 112345 26238 26240 Plus Contig4761 12729 74 SNP G/C agaggagaggtagggtttgt atgcgacacgcacttggact NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 26283 26285 Plus Contig4761 12729 74 SNP T/C gcagaccgtgtagacgcgca ggcggccggctcccgcggca NlaIII,FatI,CviAII BceAI chr2 AP004049 OJ1212_C06 112345 26518 26519 Plus Contig4761 12729 74 IND -6 acgtggcggcggcggcggcg tgggtccctagcgcggcccg chr2 AP004049 OJ1212_C06 112345 26550 26552 Plus Contig4761 12729 74 IND 1 gcggccgagaggaagtcgac ctgcgcgtggacgggcgacg chr2 AP004049 OJ1212_C06 112345 26552 26554 Plus Contig4761 12729 74 IND 1 ggccgagaggaagtcgacac gcgcgtggacgggcgacggc chr2 AP004049 OJ1212_C06 112345 26589 26591 Plus Contig4761 12729 74 SNP A/G cggcggcgttgccatattaa tttctccaaacaagggaggg ApoI,Tsp509I chr2 AP004049 OJ1212_C06 112345 26632 26633 Plus Contig4761 12729 74 IND -1 agaggagaagagcaggacaa tttttttaaaattttttttc chr2 AP004049 OJ1212_C06 112345 26641 26644 Plus Contig4761 12729 74 IND 2 gagcaggacaatttttttaa tttttttttcttcgaacttt chr2 AP004049 OJ1212_C06 112345 26649 26651 Plus Contig4761 12729 74 SNP T/A caatttttttaaaatttttt ttcttcgaacttttaacttt chr2 AP004049 OJ1212_C06 112345 26656 26658 Plus Contig4761 12729 74 SNP G/A tttaaaatttttttttcttc aacttttaactttttcgtca NspV,TaqI chr2 AP004049 OJ1212_C06 112345 26672 26674 Plus Contig4761 12729 74 SNP C/T cttcgaacttttaacttttt gtcacatcggaactttcctc chr2 AP004049 OJ1212_C06 112345 26681 26683 Plus Contig4761 12729 74 IND 1 tttaactttttcgtcacatc gaactttcctcaacacatat chr2 AP004049 OJ1212_C06 112345 26729 26731 Plus Contig4761 12729 74 SNP T/C acttttctatcacatcgttt aattttttcaaactttcaat MseI chr2 AP004049 OJ1212_C06 112345 26754 26756 Plus Contig4761 12729 74 SNP G/A ttttcaaactttcaatttta tgtgaaactaaacacagctg MseI chr2 AP004049 OJ1212_C06 112345 26759 26761 Plus Contig4761 12729 74 SNP A/G aaactttcaattttagtgtg aactaaacacagctgtcatt chr2 AP004049 OJ1212_C06 112345 26773 26775 Plus Contig4761 12729 74 SNP T/C agtgtgaaactaaacacagc gtcatttgttggatctgcta PvuII,MspA1I,AluI chr2 AP004049 OJ1212_C06 112345 26786 26788 Plus Contig4761 12729 74 SNP A/T acacagctgtcatttgttgg tctgctaactatatatagta BstYI,AlwI,DpnI,BstKTI,BfuCI chr2 AP004049 OJ1212_C06 112345 26868 26870 Plus Contig4761 12729 74 SNP C/T attttcggaaacatttttat gtgtttcctgtggtttttat chr2 AP004049 OJ1212_C06 112345 26926 26928 Plus Contig4761 12729 74 SNP C/G tatggttttactgtttgaaa tgactcatctttgtgctaat Tsp45I,MaeIII chr2 AP004049 OJ1212_C06 112345 26945 26947 Plus Contig4761 12729 74 SNP A/C actgactcatctttgtgcta tgatgaaatttactcaattc chr2 AP004049 OJ1212_C06 112345 26947 26949 Plus Contig4761 12729 74 SNP G/A tgactcatctttgtgctaat atgaaatttactcaattcaa chr2 AP004049 OJ1212_C06 112345 27175 27177 Plus Contig4761 12729 74 SNP T/A ctagtttgtcttagatttcc aaatattagattggcaccta chr2 AP004049 OJ1212_C06 112345 27192 27194 Plus Contig4761 12729 74 SNP C/T tcctaaatattagattggca ctagtatataaagggggcct BspLI,BanI BsaBI,SfaNI chr2 AP004049 OJ1212_C06 112345 27214 27216 Plus Contig4761 12729 74 SNP G/C tagtatataaagggggcctg tattgtattaaggactaagc BssKI,BseBI,ScrFI,AjnI BstC8I chr2 AP004049 OJ1212_C06 112345 27374 27376 Plus Contig4761 12729 74 SNP C/T ttggtatcagagccctcatc agcgcttgctttgtcgctgg FokI,BseGI BfaI chr2 AP004049 OJ1212_C06 112345 27385 27387 Plus Contig4761 12729 74 SNP T/C gccctcatccagcgcttgct tgtcgctgggttccgctcga chr2 AP004049 OJ1212_C06 112345 27451 27453 Plus Contig4761 12729 74 SNP A/G cttgcgtcacttccgccgct catctgttgtgttccaccgt MspA1I,Fnu4HI,ApeKI,CviRI,SfaNI chr2 AP004049 OJ1212_C06 112345 27536 27538 Plus Contig4761 12729 74 SNP C/T ggaagacagcacaaccatgg tgatttggccaagacacttg CviJI,BstMWI chr2 AP004049 OJ1212_C06 112345 27623 27625 Plus Contig4761 12729 74 SNP G/C atgggaaaaagggagcagtg tgctaatctggatgatgaca Fnu4HI,ApeKI chr2 AP004049 OJ1212_C06 112345 27672 27674 Plus Contig4761 12729 74 SNP A/G gttccccgttatcacaagct acctttccaatatttgatgg chr2 AP004049 OJ1212_C06 112345 27704 27706 Plus Contig4761 12729 74 SNP A/C atttgatggagaagaagatc cttgacctggcttaatcggt BstYI,BslI,AlwI chr2 AP004049 OJ1212_C06 112345 27804 27806 Plus Contig4761 12729 74 SNP G/A tatcacatgacgggtgaggc caacaatggtatattcaatt Hin6I,HhaI MslI chr2 AP004049 OJ1212_C06 112345 27830 27832 Plus Contig4761 12729 74 SNP A/G atggtatattcaattttcca agataatggactcgtgaact Hpy188III chr2 AP004049 OJ1212_C06 112345 27849 27851 Plus Contig4761 12729 74 SNP C/G aaagataatggactcgtgaa tggtcagtttttgagcactt Hpy8I,BsrI chr2 AP004049 OJ1212_C06 112345 27916 27918 Plus Contig4761 12729 74 SNP G/A tccgtaacaatattcttggt aattgtccgcacttcgacga HphI chr2 AP004049 OJ1212_C06 112345 27935 27937 Plus Contig4761 12729 74 SNP G/A tgaattgtccgcacttcgac aaccgggactgtggcagaat Hpy99I chr2 AP004049 OJ1212_C06 112345 28071 28073 Plus Contig4761 12729 74 SNP T/C ttaagtattgatgttgagct caaaatacagctaatcttca SacI,Ecl136II,Bsp1286I,BanII,BsiHKAI chr2 AP004049 OJ1212_C06 112345 28078 28080 Plus Contig4761 12729 74 SNP A/C ttgatgttgagcttcaaaat cagctaatcttcaggccgcc chr2 AP004049 OJ1212_C06 112345 28084 28086 Plus Contig4761 12729 74 SNP A/G ttgagcttcaaaatacagct atcttcaggccgccatgagc PvuII,MspA1I,DpnI,BstKTI,BfuCI chr2 AP004049 OJ1212_C06 112345 28196 28198 Plus Contig4761 12729 74 SNP G/A gcgttctgcactttcttttc ttctgctccagcaccttccc chr2 AP004049 OJ1212_C06 112345 28203 28204 Plus Contig4761 12729 74 IND -12 gcactttcttttcgttctgc tccagcaccttcccgtgtgg chr2 AP004049 OJ1212_C06 112345 28224 28226 Plus Contig4761 12729 74 SNP T/C ccagcaccttcccgtgtggg agtagcacgtcttcttctgc chr2 AP004049 OJ1212_C06 112345 28310 28312 Plus Contig4761 12729 74 SNP T/C cacaaggtttcgtcgcttgt agcagctgagatggctgagc AlwNI chr2 AP004049 OJ1212_C06 112345 28604 28606 Plus Contig4761 12729 74 SNP A/G tgtggctactgaggcagcac ccgtcttggcctctcgccta TaaI BstC8I,BstMWI,BglI chr2 AP004049 OJ1212_C06 112345 28681 28683 Plus Contig4761 12729 74 SNP A/G gtgatcaagtcactagctca gcatctgctcaggtattcct SmlI DdeI,BspCNI,BseMII chr2 AP004049 OJ1212_C06 112345 28754 28756 Plus Contig4761 12729 74 SNP T/A ttgttatgttattccactag aggctataatgtggtattgg SpeI chr2 AP004049 OJ1212_C06 112345 28762 28764 Plus Contig4761 12729 74 SNP A/G ttattccactagtaggctat atgtggtattgggtgttcag chr2 AP004049 OJ1212_C06 112345 28839 28841 Plus Contig4761 12729 74 SNP T/C gataagctcaccatgtcttt tggagggacgatcatcaagt Hpy188III chr2 AP004049 OJ1212_C06 112345 28857 28859 Plus Contig4761 12729 74 SNP A/G ttttggagggacgatcatca gtagcttggcatggtcatgg chr2 AP004049 OJ1212_C06 112345 28890 28892 Plus Contig4761 12729 74 SNP T/C ggtcatggtggtgattcttt ccgccgcaggctcatgcttt FauI,BslI chr2 AP004049 OJ1212_C06 112345 28892 28894 Plus Contig4761 12729 74 SNP C/T tcatggtggtgattcttttc gccgcaggctcatgctttga AciI chr2 AP004049 OJ1212_C06 112345 28965 28967 Plus Contig4761 12729 74 SNP T/G gaatttgatgatctttttaa gagccaagtggactaccacc BspLI chr2 AP004049 OJ1212_C06 112345 29029 29031 Plus Contig4761 12729 74 SNP G/A ttcctttgatttctgacaca cagcggtggctgttcgtcct Fnu4HI,BstMWI,BbvI,ApeKI chr2 AP004049 OJ1212_C06 112345 29032 29034 Plus Contig4761 12729 74 SNP G/A ctttgatttctgacacagca cggtggctgttcgtccttac Fnu4HI,BbvI,ApeKI,MspA1I TaaI chr2 AP004049 OJ1212_C06 112345 29069 29071 Plus Contig4761 12729 74 SNP T/C ttaccgttatccacaactcc gaaggatgagattgaatgac chr2 AP004049 OJ1212_C06 112345 29086 29088 Plus Contig4761 12729 74 SNP T/C tcctgaaggatgagattgaa gacaatgtgctgcaatgttg chr2 AP004049 OJ1212_C06 112345 29106 29108 Plus Contig4761 12729 74 SNP G/A aaacaatgtgctgcaatgtt acccaaggtatcatccagaa HpaI,MseI chr2 AP004049 OJ1212_C06 112345 29149 29151 Plus Contig4761 12729 74 SNP C/T gtgattccgaattttcttct cagtattacttgtcaagaag chr2 AP004049 OJ1212_C06 112345 29186 29188 Plus Contig4761 12729 74 SNP G/A gaagcaagataaaacttggc tttttgtgtggattaccgag MslI chr2 AP004049 OJ1212_C06 112345 29222 29224 Plus Contig4761 12729 74 SNP C/T ccgagcccttaatagcaaaa gataaagaacaaatatccaa chr2 AP004049 OJ1212_C06 112345 29540 29542 Plus Contig4761 12729 74 SNP A/T ttgggcagaacatcttcaac tgttagagcagttttgttgg NspI,BspLU11I,AflIII,NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 29590 29592 Plus Contig4761 12729 74 SNP T/C aacaccaaatggtgcttaaa gatccaagtgtctctttggt chr2 AP004049 OJ1212_C06 112345 29661 29663 Plus Contig4761 12729 74 SNP C/T gtttctgcaagtggggtggc atggatcctagcaaggtaga EaeI,MscI,BshFI,BstDSI,StyI,NcoI,BsaJI,NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 29881 29883 Plus Contig4761 12729 74 SNP G/C taaagaaggccttagtatct cttccttgctacaacttctg chr2 AP004049 OJ1212_C06 112345 29900 29902 Plus Contig4761 12729 74 SNP T/C tgcttccttgctacaacttc ggattttactaaacgattta BsaWI,BspEI,MspI chr2 AP004049 OJ1212_C06 112345 29952 29954 Plus Contig4761 12729 74 SNP T/C gatgcctctggtgtgggttt ggtgctgttttacaccaggg chr2 AP004049 OJ1212_C06 112345 30114 30116 Plus Contig4761 12729 74 SNP T/C ggacgatcctttacgattcg acagatcattatagcttgaa Csp6I,RsaI chr2 AP004049 OJ1212_C06 112345 30224 30226 Plus Contig4761 12729 74 SNP C/T ctttgaagttgagttccggc aggaaaacacaatggagctg EaeI,BshFI,BssKI,BseBI,ScrFI,AjnI BfaI chr2 AP004049 OJ1212_C06 112345 30347 30349 Plus Contig4761 12729 74 SNP T/C acaagagaccaacacactgc agaactcattaccaaaaggg BfaI chr2 AP004049 OJ1212_C06 112345 30472 30474 Plus Contig4761 12729 74 SNP T/G cagcttctgcatgttggccc tgctcttggctgatgcgcac Bsp1286I,BsiHKAI chr2 AP004049 OJ1212_C06 112345 30488 30490 Plus Contig4761 12729 74 SNP C/T gcccttgctcttggctgatg gcacgggatgggacatgagg FspAI,FspI,Hin6I,HhaI,SfaNI Hpy8I,Bsp1286I,Bme1580I,ApaLI,BsiHKAI,CviRI chr2 AP004049 OJ1212_C06 112345 30593 30595 Plus Contig4761 12729 74 SNP A/G gaaggattatgttaagagct ctcggtatgtcaacaaaaca Fnu4HI,ApeKI chr2 AP004049 OJ1212_C06 112345 30608 30610 Plus Contig4761 12729 74 SNP A/G gagctactcggtatgtcaac aaacaagactgaacatcgac chr2 AP004049 OJ1212_C06 112345 30626 30628 Plus Contig4761 12729 74 SNP G/T acaaaacaagactgaacatc acatcctgcaggcttactgc TaqI chr2 AP004049 OJ1212_C06 112345 30635 30637 Plus Contig4761 12729 74 SNP C/T gactgaacatcgacatcctg aggcttactgcaacctttag SbfI,BspMAI,CviRI,BstC8I chr2 AP004049 OJ1212_C06 112345 30656 30658 Plus Contig4761 12729 74 SNP T/C aggcttactgcaacctttag agttccttctgctgtttggg chr2 AP004049 OJ1212_C06 112345 30751 30753 Plus Contig4761 12729 74 SNP T/C tcattttgacggtggttgat gtttttctaagtatgcccac DpnI,BstKTI,BfuCI chr2 AP004049 OJ1212_C06 112345 30835 30837 Plus Contig4761 12729 74 SNP G/A aggcattttatgatgatatc tccgcttgcacggtatttct chr2 AP004049 OJ1212_C06 112345 30846 30848 Plus Contig4761 12729 74 SNP C/T gatgatatcgtccgcttgca ggtatttcttgttctattgt TaaI NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 30849 30851 Plus Contig4761 12729 74 SNP T/C gatatcgtccgcttgcacgg atttcttgttctattgtgag TaaI BstMWI,BceAI chr2 AP004049 OJ1212_C06 112345 30853 30855 Plus Contig4761 12729 74 SNP T/C tcgtccgcttgcacggtatt cttgttctattgtgagtgat chr2 AP004049 OJ1212_C06 112345 30881 30883 Plus Contig4761 12729 74 SNP T/C tattgtgagtgatagagatc agtttttactagcacatttt BglII,BfaI AlwI chr2 AP004049 OJ1212_C06 112345 31031 31033 Plus Contig4761 12729 74 SNP A/G tcgttgcctttcgggagatc tccaaagaattggttacagt chr2 AP004049 OJ1212_C06 112345 31116 31118 Plus Contig4761 12729 74 SNP C/G tcccttcgtgagacaccttt aaggttgtgtatggtcgaga chr2 AP004049 OJ1212_C06 112345 31175 31177 Plus Contig4761 12729 74 SNP G/A ttaccagccagggtcttcct tgttgtggctgtggacaaat chr2 AP004049 OJ1212_C06 112345 31179 31181 Plus Contig4761 12729 74 SNP T/C cagccagggtcttcctgtgt gtggctgtggacaaatagat chr2 AP004049 OJ1212_C06 112345 31184 31186 Plus Contig4761 12729 74 SNP C/T agggtcttcctgtgttgtgg tgtggacaaatagatgagga CviJI chr2 AP004049 OJ1212_C06 112345 31195 31197 Plus Contig4761 12729 74 SNP T/C gtgttgtggctgtggacaaa agatgaggagtcgaaatgga chr2 AP004049 OJ1212_C06 112345 31210 31212 Plus Contig4761 12729 74 SNP A/G acaaatagatgaggagtcga atggatttttggttgaaatt Hpy188III chr2 AP004049 OJ1212_C06 112345 31214 31216 Plus Contig4761 12729 74 SNP G/A atagatgaggagtcgaaatg atttttggttgaaattcgag TspDTI,ApoI,Tsp509I chr2 AP004049 OJ1212_C06 112345 31316 31318 Plus Contig4761 12729 74 SNP A/G tgaatttgaggttggtgaat ggcatggctacggttacacc chr2 AP004049 OJ1212_C06 112345 31403 31405 Plus Contig4761 12729 74 SNP G/T cccaagattttatggccctt tttaattgaggagagaattg chr2 AP004049 OJ1212_C06 112345 31463 31465 Plus Contig4761 12729 74 SNP T/G caagcttcctcctcgagctc tattcacaatgtttttcatg chr2 AP004049 OJ1212_C06 112345 31501 31503 Plus Contig4761 12729 74 SNP A/T atgtggctttactaaaaaaa ttgaaggtgtggccccaaca ApoI chr2 AP004049 OJ1212_C06 112345 31534 31536 Plus Contig4761 12729 74 SNP G/C ccccaacagatattgttcag ttcctgacattgttcatggc BspLI CviJI,AluI chr2 AP004049 OJ1212_C06 112345 31556 31558 Plus Contig4761 12729 74 SNP A/G tcctgacattgttcatggcc ggttatccctgcaccagctg MscI,BseBI,AjnI MspI,NciI chr2 AP004049 OJ1212_C06 112345 31561 31563 Plus Contig4761 12729 74 SNP A/G acattgttcatggccaggtt tccctgcaccagctgctgct chr2 AP004049 OJ1212_C06 112345 31588 31590 Plus Contig4761 12729 74 SNP G/T caccagctgctgctatcaaa ctaggtggaatcaaggaatt BstMWI,CviJI,AluI chr2 AP004049 OJ1212_C06 112345 31603 31605 Plus Contig4761 12729 74 SNP G/A tcaaagctaggtggaatcaa gaattcaagaagttatcata chr2 AP004049 OJ1212_C06 112345 31617 31619 Plus Contig4761 12729 74 SNP T/A aatcaaggaattcaagaagt atcatacaatgggtaggttc chr2 AP004049 OJ1212_C06 112345 31626 31628 Plus Contig4761 12729 74 SNP A/G attcaagaagttatcataca tgggtaggttcatctccaga TaaI,TspRI chr2 AP004049 OJ1212_C06 112345 31774 31775 Plus Contig4761 12729 74 IND -2 atggaatcaaataccatagg tataggaataggaataggaa chr2 AP004049 OJ1212_C06 112345 31776 31777 Plus Contig4761 12729 74 IND -4 ggaatcaaataccataggta taggaataggaataggaata chr2 AP004049 OJ1212_C06 112345 31789 31790 Plus Contig4761 12729 74 IND -2 ataggtataggaataggaat aggaataatcagtagataat chr2 AP004049 OJ1212_C06 112345 31790 31791 Plus Contig4761 12729 74 IND -13 taggtataggaataggaata ggaataatcagtagatatta chr2 AP004049 OJ1212_C06 112345 31796 31797 Plus Contig4761 12729 74 IND -2 taggaataggaataggaata atcagtagatatatctaata chr2 AP004049 OJ1212_C06 112345 31797 31798 Plus Contig4761 12729 74 IND -1 aggaataggaataggaataa tcagtagatatatctaatct chr2 AP004049 OJ1212_C06 112345 31798 31799 Plus Contig4761 12729 74 IND -3 ggaataggaataggaataat cagtagatatatctaattat chr2 AP004049 OJ1212_C06 112345 31833 31835 Plus Contig4761 12729 74 SNP A/C attctagttggtttaggatt tgtttcctattcctagtttg PfeI,HinfI chr2 AP004049 OJ1212_C06 112345 31881 31883 Plus Contig4761 12729 74 SNP C/T tttcctaaatattagattgg acctagtatataaagggggc KpnI,Acc65I,Csp6I,RsaI chr2 AP004049 OJ1212_C06 112345 31883 27091 Plus Contig4761 12729 74 # chr2 AP004049 OJ1212_C06 112345 105553 105555 Plus Contig28744 3357 92 SNP A/G gcgacggatccggcctcccc ccggccacagatctagaact FauI,AciI,NaeI,NgoAIV,BstC8I chr2 AP004049 OJ1212_C06 112345 105555 105557 Plus Contig28744 3357 92 SNP C/T gacggatccggcctccccac ggccacagatctagaacttg BsrFI,MspI TspRI,BsrI,MscI chr2 AP004049 OJ1212_C06 112345 105573 105575 Plus Contig28744 3357 92 SNP T/G accggccacagatctagaac tggaggcgtaggggaggaga TaiI,MaeII chr2 AP004049 OJ1212_C06 112345 105611 105613 Plus Contig28744 3357 92 SNP C/T agagagtcatagcagatgtc gggtaccgcgtggtcacgca BssKI,MspI,ScrFI,NciI chr2 AP004049 OJ1212_C06 112345 105627 105629 Plus Contig28744 3357 92 SNP A/G tgtccgggtaccgcgtggtc cgcagtgggcgcagaggaac Tsp45I,MaeIII,DraIII ThaI,Hin6I,BstMWI,HhaI chr2 AP004049 OJ1212_C06 112345 105721 105723 Plus Contig28744 3357 92 SNP T/C tcccagcggtggcaggccgc gatccggcctccccgcggcg MspA1I BglI chr2 AP004049 OJ1212_C06 112345 105773 105775 Plus Contig28744 3357 92 SNP C/T atccgcctccacgcggcggc agagacggatctgctccgcc EaeI,BshFI BfaI chr2 AP004049 OJ1212_C06 112345 105785 105787 Plus Contig28744 3357 92 SNP T/C gcggcggccagagacggatc gctccgccgccaccgccgcg BspLI,BamHI,AciI,BsrBI,AlwI chr2 AP004049 OJ1212_C06 112345 105807 105832 Plus Contig28744 3357 92 IND 24 ctccgccgccaccgccgcgc ccgccaatgccgccgtcgtg chr2 AP004049 OJ1212_C06 112345 105846 105848 Plus Contig28744 3357 92 SNP T/C cgcgcccgccaatgccgccg cgtggccacgcccgccgatg Hpy99I,BceAI TauI,Fnu4HI,AciI,BstDSI,BsaJI chr2 AP004049 OJ1212_C06 112345 105877 105879 Plus Contig28744 3357 92 SNP C/T cccgccgatgccgccatctc gctgccctaaccgagggcgc MspA1I,AciI chr2 AP004049 OJ1212_C06 112345 105898 105900 Plus Contig28744 3357 92 SNP T/C gctgccctaaccgagggcgc gccgtcaccgaggaggagag ApeKI NarI,KasI,EgeI,BspLI,BbeI,BsaHI,BanI,TauI,AciI chr2 AP004049 OJ1212_C06 112345 105905 105907 Plus Contig28744 3357 92 SNP A/G taaccgagggcgctgccgtc ccgaggaggagaggaaggat Tsp45I,MaeIII BstMWI,Hpy99I chr2 AP004049 OJ1212_C06 112345 105915 105917 Plus Contig28744 3357 92 SNP A/G cgctgccgtcaccgaggagg gaggaaggatggggaggagg BseRI BslI chr2 AP004049 OJ1212_C06 112345 105989 105991 Plus Contig28744 3357 92 SNP G/A atgggaggaataatggtagc cgcatgatggggaggacggg BssHII,ThaI chr2 AP004049 OJ1212_C06 112345 106040 106042 Plus Contig28744 3357 92 SNP G/C agagggagatgggaggttgg cagcgcgtgggttaggctat Fnu4HI,BbvI,ApeKI EaeI,MscI,CviJI,BshFI,BstC8I,BslI,PflMI chr2 AP004049 OJ1212_C06 112345 106092 106094 Plus Contig28744 3357 92 SNP C/T gatcacttaattagcaagcc gcaagcggcttatttttgtg FauI,AciI CviRI chr2 AP004049 OJ1212_C06 112345 106109 106111 Plus Contig28744 3357 92 SNP T/C gcccgcaagcggcttatttt gtgtgcgagactgttaagtg chr2 AP004049 OJ1212_C06 112345 106115 106117 Plus Contig28744 3357 92 SNP C/T aagcggcttatttttgtgtg gagactgttaagtgaaccgc chr2 AP004049 OJ1212_C06 112345 106117 106119 Plus Contig28744 3357 92 SNP A/G gcggcttatttttgtgtgcg gactgttaagtgaaccgcac BsmFI,BslFI,AciI chr2 AP004049 OJ1212_C06 112345 106119 106121 Plus Contig28744 3357 92 SNP A/T ggcttatttttgtgtgcgag ctgttaagtgaaccgcacac TaaI PleI,MlyI,HinfI chr2 AP004049 OJ1212_C06 112345 106160 106162 Plus Contig28744 3357 92 SNP A/T aaaaattgattttcctgtgc agcgacggcccagagcccgt CviRI BmtI,NheI,BfaI chr2 AP004049 OJ1212_C06 112345 106268 106270 Plus Contig28744 3357 92 SNP T/C atcttgcatgtactggtgct gaagaaacagaatgatcatg Bsp1286I,BsiHKAI,TaqI chr2 AP004049 OJ1212_C06 112345 106633 106635 Plus Contig28744 3357 92 SNP G/A gccgacacgtggaagacctg gcccaccgccatcaaaagcc BssKI,BseBI,BsaJI,ScrFI,AjnI,BspLI,Bsp120I,Bme1580I,ApaI,BshFI Bpu10I,DdeI chr2 AP004049 OJ1212_C06 112345 106694 106696 Plus Contig28744 3357 92 SNP C/A gaccatcttgcagaccgagc tcgtactccctccgtaaaaa CviJI,MnlI SfaNI chr2 AP004049 OJ1212_C06 112345 106703 106705 Plus Contig28744 3357 92 SNP C/G gcagaccgagcctcgtactc ctccgtaaaaaaaaaagaca MnlI chr2 AP004049 OJ1212_C06 112345 106710 106711 Plus Contig28744 3357 92 IND -1 gagcctcgtactccctccgt aaaaaaaaaagacaaaccct chr2 AP004049 OJ1212_C06 112345 106716 106717 Plus Contig28744 3357 92 IND -1 cgtactccctccgtaaaaaa aaaagacaaaccctggattt chr2 AP004049 OJ1212_C06 112345 106720 106721 Plus Contig28744 3357 92 IND -6 ctccctccgtaaaaaaaaaa gacaaaccctggatttccgt chr2 AP004049 OJ1212_C06 112345 106721 106723 Plus Contig28744 3357 92 SNP A/T tccctccgtaaaaaaaaaag caaaccctggatttccgtgt chr2 AP004049 OJ1212_C06 112345 106731 106733 Plus Contig28744 3357 92 SNP G/A aaaaaaaaagacaaaccctg atttccgtgtccaattttga BsaJI,BssKI,BseBI,ScrFI,AjnI ApoI,Tsp509I chr2 AP004049 OJ1212_C06 112345 106750 106752 Plus Contig28744 3357 92 SNP G/A ggatttccgtgtccaatttt actgtctgtcttatatgaat Hin4I,AhdI MseI chr2 AP004049 OJ1212_C06 112345 106757 106759 Plus Contig28744 3357 92 SNP T/C cgtgtccaattttgactgtc gtcttatatgaatttttttt chr2 AP004049 OJ1212_C06 112345 106760 106762 Plus Contig28744 3357 92 SNP C/T gtccaattttgactgtctgt ttatatgaattttttttata AhdI,Hin4I chr2 AP004049 OJ1212_C06 112345 106855 106857 Plus Contig28744 3357 92 IND 1 acttgtctttttaatttttt cataattttttcaaataaac chr2 AP004049 OJ1212_C06 112345 106882 106884 Plus Contig28744 3357 92 SNP A/G tttttcaaataagacggacg tcaaatgttggacacggaaa DpnI,BstKTI,BfuCI AhdI,TaaI chr2 AP004049 OJ1212_C06 112345 106889 106891 Plus Contig28744 3357 92 SNP G/A aataagacggacgatcaaat ttggacacggaaaccagggt SspI chr2 AP004049 OJ1212_C06 112345 106895 106897 Plus Contig28744 3357 92 SNP C/T acggacgatcaaatgttgga acggaaaccagggtttgtct chr2 AP004049 OJ1212_C06 112345 106923 106925 Plus Contig28744 3357 92 IND 1 ccagggtttgtctttttttg gacggagggcgagccaacca chr2 AP004049 OJ1212_C06 112345 107286 107291 Plus Contig28744 3357 92 IND 4 ttgtccctttagagaaacaa ggggcaagaaaactagggag chr2 AP004049 OJ1212_C06 112345 107300 107302 Plus Contig28744 3357 92 SNP A/G aaacaaacaaggggcaagaa actagggagatgggaaaggg MboII,BbsI chr2 AP004049 OJ1212_C06 112345 107485 107487 Plus Contig28744 3357 92 SNP T/A attggatcccttaacaaaac atgctaccagacaataaact chr2 AP004049 OJ1212_C06 112345 107567 107569 Plus Contig28744 3357 92 SNP G/A cttcaagctttcaaagtgca gtttcctagatcccacaaaa BsgI chr2 AP004049 OJ1212_C06 112345 107600 107602 Plus Contig28744 3357 92 SNP T/A ccacaaaacctatttgatga tatacagtgtttatctcata TspDTI chr2 AP004049 OJ1212_C06 112345 107657 107659 Plus Contig28744 3357 92 SNP A/G atatacttcctccgtttcat ttataagactttctaacatt NlaIII,FatI,CviAII chr2 AP004049 OJ1212_C06 112345 107665 107667 Plus Contig28744 3357 92 SNP A/G cctccgtttcatattataag ctttctaacattgcccacat CviJI chr2 AP004049 OJ1212_C06 112345 107673 107675 Plus Contig28744 3357 92 SNP A/G tcatattataagactttcta cattgcccacattcatatat BfaI chr2 AP004049 OJ1212_C06 112345 107776 107778 Plus Contig28744 3357 92 SNP C/G aatgctagaaagtcttataa ctgaaacagaggtagtaaga CviJI,AluI chr2 AP004049 OJ1212_C06 112345 108016 108018 Plus Contig28744 3357 92 SNP T/G tccaaatgctataaaattcc aagaaagggctaaatgcatg EcoNI,DdeI Hpy188I,MboII chr2 AP004049 OJ1212_C06 112345 108115 108117 Plus Contig28744 3357 92 SNP C/T tatctctctcttctggtttc tgtgtttctcatacggttta chr2 AP004049 OJ1212_C06 112345 108332 108334 Plus Contig28744 3357 92 SNP T/C ttgatttgtgtggaaatacc tgtccttatgtatatttatt chr2 AP004049 OJ1212_C06 112345 108344 108346 Plus Contig28744 3357 92 SNP A/T gaaataccttgtccttatgt tatttatttcctagacactt chr2 AP004049 OJ1212_C06 112345 108501 108503 Plus Contig28744 3357 92 SNP G/A gccaaaaccaccctaaaaca ccatggatttgttttgtata CviJI chr2 AP004049 OJ1212_C06 112345 108602 108604 Plus Contig28744 3357 92 SNP G/A tcccgggcgaccggcgcagg ggagccggatcgggcgctcc BslI BseRI chr2 AP004049 OJ1212_C06 112345 54832 54834 Minus Contig2973 13690 94 SNP G/C gtaaccctaagctgcaatag tagctagccaacattgccta BstMWI,CviJI,AluI,BstC8I,BmtI,NheI,BfaI chr2 AP004049 OJ1212_C06 112345 54893 54895 Minus Contig2973 13690 94 SNP T/A ttttaaaataaaaacattct agtattcatacaataataaa chr2 AP004049 OJ1212_C06 112345 54937 54939 Minus Contig2973 13690 94 SNP T/C ctcttcgtttaatttcttat acattcgataacaatcatct chr2 AP004049 OJ1212_C06 112345 54968 54969 Minus Contig2973 13690 94 IND -1 acaatcatctcttaactttt catctactttgttatctcga chr2 AP004049 OJ1212_C06 112345 55044 55046 Minus Contig2973 13690 94 SNP C/G aatatatctatattttaaaa gggagaagtagctgggacag chr2 AP004049 OJ1212_C06 112345 55255 55257 Minus Contig2973 13690 94 SNP T/C gtcctcctccccatagcttc tccgatcccttcctcgctcg MnlI chr2 AP004049 OJ1212_C06 112345 55393 55395 Minus Contig2973 13690 94 SNP T/G aaatcggtattcattagagg aaaaatgggtttaagttagc chr2 AP004049 OJ1212_C06 112345 55456 55458 Minus Contig2973 13690 94 SNP C/T caaccgaagaccagtgaaaa cattttataattaagtcgtg chr2 AP004049 OJ1212_C06 112345 55584 55586 Minus Contig2973 13690 94 SNP G/C tcacaaatataacgcttaaa ttaaattaggtaaactatat chr2 AP004049 OJ1212_C06 112345 55852 55854 Minus Contig2973 13690 94 SNP A/G agttatacgtagacggctgt tagcccatagtgtcgcgtag chr2 AP004049 OJ1212_C06 112345 55916 55918 Minus Contig2973 13690 94 SNP C/T acctatctccatatataaca ttttttgtataattaactct chr2 AP004049 OJ1212_C06 112345 56060 56062 Minus Contig2973 13690 94 SNP G/A tccgacagcgtagctccaaa gaaaaaggccaggttgccgg chr2 AP004049 OJ1212_C06 112345 56087 56089 Minus Contig2973 13690 94 SNP A/G ggccaggttgccggcggggc acgtatgattgtattgaacg Hpy99I chr2 AP004049 OJ1212_C06 112345 56116 56118 Minus Contig2973 13690 94 SNP C/T ttgtattgaacgcaagttaa ttgcatggtttgtgtgatag Hpy8I,HpaI,HincII Tsp509I chr2 AP004049 OJ1212_C06 112345 56354 56356 Minus Contig2973 13690 94 IND 1 aacagtgaattaggctagca tgcagtgcagaggagggatg chr2 AP004049 OJ1212_C06 112345 56364 56365 Minus Contig2973 13690 94 IND -3 taggctagcaatgcagtgca gaggagggatggggtgacgt chr2 AP004049 OJ1212_C06 112345 56689 56691 Minus Contig2973 13690 94 SNP T/G atacggtgcatttgtacaca tacatacatcatacatggta TaaI,TatI,Csp6I,RsaI chr2 AP004049 OJ1212_C06 112345 56851 56853 Minus Contig2973 13690 94 SNP A/T tatatatatgcatgcatgca atttggtcggctcaatttgc ApoI,Tsp509I NsiI,BfrBI chr2 AP004049 OJ1212_C06 112345 56948 56950 Minus Contig2973 13690 94 SNP G/A tgactgatcgacctgcattg tcatcaggcatttaattaaa BclI,DpnI,BstKTI,BfuCI chr2 AP004049 OJ1212_C06 112345 57059 57068 Minus Contig2973 13690 94 IND 8 cagaatgcatgcgatatata cttatatgcacgacaatgtg chr2 AP004049 OJ1212_C06 112345 57223 57225 Minus Contig2973 13690 94 SNP A/T atctagctagattgaacgca gcagcagtacatgccccatc NspI,SphI,NlaIII,FatI,CviAII,CviRI chr2 AP004049 OJ1212_C06 112345 57259 57261 Minus Contig2973 13690 94 SNP A/G ccatcgtgttctatccatgt tttatatctagtacagtgat chr2 AP004049 OJ1212_C06 112345 57561 57562 Minus Contig2973 13690 94 IND -1 ttcttggacagttttttttt ccacgatgactgagagaggt chr2 AP004049 OJ1212_C06 112345 57582 57584 Minus Contig2973 13690 94 SNP A/G cacgatgactgagagaggta tccgaatgttgttaagatat chr2 AP004049 OJ1212_C06 112345 57679 57681 Minus Contig2973 13690 94 SNP G/A gagaaaggggctttactccc gttgggaacccccatatagt BssKI,ScrFI,NciI,MspI chr2 AP004049 OJ1212_C06 112345 57693 57695 Minus Contig2973 13690 94 SNP A/C actcccggttgggaaccccc tatagtctcggttatacaac SfcI chr2 AP004049 OJ1212_C06 112345 57701 57703 Minus Contig2973 13690 94 SNP T/C ttgggaacccccatatagtc cggttatacaaccgggacta BsmAI BssKI,ScrFI,NciI,MspI chr2 AP004049 OJ1212_C06 112345 57722 57737 Minus Contig2973 13690 94 IND 14 cggttatacaaccgggacta aaaatacccatctttagtcc chr2 AP004049 OJ1212_C06 112345 57769 57771 Minus Contig2973 13690 94 SNP T/C ttagtcccgggtgaaataac gggactaaaaatctatcttt BsrI,BmrI BssKI,MspI,ScrFI,NciI chr2 AP004049 OJ1212_C06 112345 57783 57785 Minus Contig2973 13690 94 SNP T/C aataactgggactaaaaatc atctttagtcctagttggtg BccI chr2 AP004049 OJ1212_C06 112345 57795 57797 Minus Contig2973 13690 94 SNP T/G acaaaatctatctttagtcc agttggtgttaccaaccggg BfaI Hpy188I chr2 AP004049 OJ1212_C06 112345 57852 57859 Minus Contig2973 13690 94 IND 6 ccacgtgactgacgcaggca gtcccggttgatcttaccaa chr2 AP004049 OJ1212_C06 112345 57859 57864 Minus Contig2973 13690 94 IND 4 actgacgcaggcatctttag ggttgatcttaccaaccggg chr2 AP004049 OJ1212_C06 112345 57864 57869 Minus Contig2973 13690 94 IND 4 cgcaggcatctttagtcccg atcttaccaaccgggactaa chr2 AP004049 OJ1212_C06 112345 57869 57871 Minus Contig2973 13690 94 IND 1 gcatctttagtcccggttga cttaccaaccgggactaaag chr2 AP004049 OJ1212_C06 112345 57872 57874 Minus Contig2973 13690 94 IND 1 tctttagtcccggttgatct accaaccgggactaaagact chr2 AP004049 OJ1212_C06 112345 57874 57877 Minus Contig2973 13690 94 IND 2 tttagtcccggttgatctta aaccgggactaaagactttt chr2 AP004049 OJ1212_C06 112345 57878 57881 Minus Contig2973 13690 94 IND 2 gtcccggttgatcttaccaa gggactaaagactttttttc chr2 AP004049 OJ1212_C06 112345 57881 57884 Minus Contig2973 13690 94 IND 2 ccggttgatcttaccaaccg actaaagactttttttcctc chr2 AP004049 OJ1212_C06 112345 57886 57893 Minus Contig2973 13690 94 IND 6 tgatcttaccaaccgggact tttttttcctccttcggttc chr2 AP004049 OJ1212_C06 112345 57922 57925 Minus Contig2973 13690 94 IND 2 ccttcggttctttctctttt ttttttttcagttttttcct chr2 AP004049 OJ1212_C06 112345 57946 57948 Minus Contig2973 13690 94 SNP A/G ttttttcagttttttccttc ttcatatcgattcattcaca chr2 AP004049 OJ1212_C06 112345 58081 58083 Minus Contig2973 13690 94 SNP C/T cacattcacaaatcaacatt agaaatcaacatccacaaat Hpy188I chr2 AP004049 OJ1212_C06 112345 58259 58261 Minus Contig2973 13690 94 SNP A/G gcgcccggccggtgccggcc gcctctcatcccgccacctc Bsh1285I,EagI,FseI,NaeI,NgoAIV,BsrFI,MspI,BshFI chr2 AP004049 OJ1212_C06 112345 58280 58282 Minus Contig2973 13690 94 SNP A/G gcctctcatcccgccacctc cgccgggccgccaccggtcg ThaI,Hin6I,HhaI chr2 AP004049 OJ1212_C06 112345 58285 58287 Minus Contig2973 13690 94 SNP G/A tcatcccgccacctcacgcc ggccgccaccggtcggcctt BslI,MspI,NciI,Sau96I BseBI,AjnI chr2 AP004049 OJ1212_C06 112345 58298 58300 Minus Contig2973 13690 94 SNP T/C tcacgccgggccgccaccgg cggccttcatctcgctgctg BsaWI,PinAI EaeI,EagI,FseI,CviJI,BshFI,NaeI,NgoAIV,BstC8I,BsrFI,MspI chr2 AP004049 OJ1212_C06 112345 58310 58312 Minus Contig2973 13690 94 SNP T/C gccaccggtcggccttcatc cgctgctgcttccgtcgcca FauI,MspA1I,FokI,BseGI,AciI chr2 AP004049 OJ1212_C06 112345 58330 58332 Minus Contig2973 13690 94 SNP A/G tcgctgctgcttccgtcgcc cccgccggaggggaggggag TauI,Fnu4HI,AciI,BstC8I chr2 AP004049 OJ1212_C06 112345 58335 58337 Minus Contig2973 13690 94 SNP C/T gctgcttccgtcgccacccg cggaggggaggggaggggag FauI,AciI,MspI Hpy99I,Hpy188I chr2 AP004049 OJ1212_C06 112345 58415 58417 Minus Contig2973 13690 94 SNP G/A tcctcggcgcgtaagatggc aggagaaggggatcggagga BseRI chr2 AP004049 OJ1212_C06 112345 58501 58503 Minus Contig2973 13690 94 SNP C/T ctcgatccgagtcacgcgta gcctcgatctctccgtgcat SunI,Csp6I,RsaI MslI chr2 AP004049 OJ1212_C06 112345 58539 58541 Minus Contig2973 13690 94 SNP G/A catgccgatcttttttcccg ttggtgttaccaaccgggac BssKI,ScrFI,NciI,MspI Hpy188III chr2 AP004049 OJ1212_C06 112345 58607 58609 Minus Contig2973 13690 94 SNP C/G cctatccttttttgaaccgg actaaaaatgatctttagtc BsrFI BssKI,ScrFI,NciI,BsmFI,BslFI chr2 AP004049 OJ1212_C06 112345 58629 58631 Minus Contig2973 13690 94 IND 1 ctaaaaatgatctttagtca ccaaccgggactaaagatca chr2 AP004049 OJ1212_C06 112345 58654 58656 Minus Contig2973 13690 94 SNP G/A ccgggactaaagatcaaaaa tagctctaaccttttcaacc chr2 AP004049 OJ1212_C06 112345 58698 58700 Minus Contig2973 13690 94 SNP T/C actaaagataatctttagtc tggtttttattgcaatcggg BssKI,BseBI,ScrFI,AjnI chr2 AP004049 OJ1212_C06 112345 58700 58702 Minus Contig2973 13690 94 SNP G/A taaagataatctttagtctt gtttttattgcaatcgggac DdeI chr2 AP004049 OJ1212_C06 112345 58714 58716 Minus Contig2973 13690 94 SNP T/C agtcttggtttttattgcaa cgggactattgtggaatttg Hpy188III BssKI,MspI,ScrFI,NciI chr2 AP004049 OJ1212_C06 112345 58771 58773 Minus Contig2973 13690 94 SNP A/G tggtttctccaccagtgcaa gaaaggatgtgcatcagagt BslI chr2 AP004049 OJ1212_C06 112345 58853 58855 Minus Contig2973 13690 94 SNP C/T ctaaaccagccaatcatcgt gagcctactacaacaacacc Hpy99I,TaqI chr2 AP004049 OJ1212_C06 112345 58967 58969 Minus Contig2973 13690 94 SNP T/G aagaaactggaggccaagga agcttggacttagctgtaag chr2 AP004049 OJ1212_C06 112345 59030 59032 Minus Contig2973 13690 94 SNP T/C attctatgatgaacaattgg atatgtgattattggttttg NdeI chr2 AP004049 OJ1212_C06 112345 59035 59037 Minus Contig2973 13690 94 SNP G/A atgatgaacaattggtatat tgattattggttttgatatt chr2 AP004049 OJ1212_C06 112345 59058 59060 Minus Contig2973 13690 94 SNP G/A attattggttttgatatttg aatttattcacgaagtagtt XmnI chr2 AP004049 OJ1212_C06 112345 59060 72876 Minus Contig2973 13690 94 # chr2 AP004049 OJ1212_C06 112345 72912 72914 Minus Contig2973 13690 94 SNP T/C tgttattttatgtgaccggt cgaccgggctgtgtatgccg TaqI RsrII,AvaII,Sau96I,Hpy188I chr2 AP004049 OJ1212_C06 112345 72923 72925 Minus Contig2973 13690 94 SNP G/A gtgaccggttcgaccgggct tgtatgccggtcagaccggt chr2 AP004049 OJ1212_C06 112345 73025 73027 Minus Contig2973 13690 94 SNP G/T ggtttcgggttgtttctttg atatccgtaattgtttcatg EcoRV chr2 AP004049 OJ1212_C06 112345 73095 73097 Minus Contig2973 13690 94 SNP C/T gtatgtaatactgttgtttg tactaatgagtcaagttggg MaeIII chr2 AP004049 OJ1212_C06 112345 73127 73129 Minus Contig2973 13690 94 SNP T/C caagttggggatagcttggt tcggaatatggtttctttgt BsaI,BsmAI chr2 AP004049 OJ1212_C06 112345 73181 73183 Minus Contig2973 13690 94 SNP G/A agagttgatgcacgtggttg tgaagatttcatatggcata HphI TspDTI chr2 AP004049 OJ1212_C06 112345 73190 73192 Minus Contig2973 13690 94 SNP T/C gcacgtggttggtgaagatt catatggcatacgatggagg PfeI,HinfI chr2 AP004049 OJ1212_C06 112345 73346 73348 Minus Contig2973 13690 94 SNP G/A tagtatgagtttggttcgtg ctttaggctgcctacctcat CviJI Hpy188III,Tsp45I,MaeIII chr2 AP004049 OJ1212_C06 112345 73369 73371 Minus Contig2973 13690 94 SNP G/A ttaggctgcctacctcatgt taaatagagggggagcgtga chr2 AP004049 OJ1212_C06 112345 73494 73496 Minus Contig2973 13690 94 SNP C/T ttgttggtgcactttgtaaa acagagagaagtaataaagt Hpy8I chr2 AP004049 OJ1212_C06 112345 73518 73520 Minus Contig2973 13690 94 SNP T/C gagagaagtaataaagttgt atctaatttgagagttcttc chr2 AP004049 OJ1212_C06 112345 73583 73585 Minus Contig2973 13690 94 SNP T/C cggtcaaaccggcatcccac ggcggtcagaccggcaacaa TspRI,BsrI SgrAI,BsrFI,MspI chr2 AP004049 OJ1212_C06 112345 73633 73635 Minus Contig2973 13690 94 SNP G/A agaccgacggcgcaagggca ttagaccggcggcacagaca Tsp509I chr2 AP004049 OJ1212_C06 112345 73647 73649 Minus Contig2973 13690 94 SNP A/G agggcagttagaccggcggc cagacaagcggcggcaagcg Hin6I,HhaI chr2 AP004049 OJ1212_C06 112345 73788 73789 Minus Contig2973 13690 94 IND -1 tggagggtaacttttatttt cgctaaaagttttcggtttt chr2 AP004049 OJ1212_C06 112345 73849 73851 Minus Contig2973 13690 94 SNP C/T cccttctgattagcttagtt ttgtgtttcgattctacatt chr2 AP004049 OJ1212_C06 112345 73917 73919 Minus Contig2973 13690 94 SNP C/T agccaccgtcttcatcgtac gatgaagctcctctcaaaag chr2 AP004049 OJ1212_C06 112345 74255 74257 Minus Contig2973 13690 94 SNP C/T tccccggcctcccttctctc cctctagatctgtctatgga chr2 AP004049 OJ1212_C06 112345 74768 74769 Minus Contig2973 13690 94 IND -1 ggaaaatatagaattttttt aataaaaacaaacatattca chr2 AP004049 OJ1212_C06 112345 74882 74884 Minus Contig2973 13690 94 SNP A/G cgatttataatacgaaatga gtgagttgaatttgcatgtt TspDTI HphI chr2 AP004049 OJ1212_C06 112345 75050 75052 Minus Contig2973 13690 94 SNP G/C acgaagattgatacatgcaa attcaaacttttttcttcaa PfeI,HinfI chr2 AP004049 OJ1212_C06 112345 75060 75062 Minus Contig2973 13690 94 SNP T/A atacatgcaagattcaaact ttttcttcaaactttcaact chr2 AP004049 OJ1212_C06 112345 75086 75088 Minus Contig2973 13690 94 SNP A/G ttcaaactttcaacttttcc tcatatcaaatatttggaca BccI chr2 AP004049 OJ1212_C06 112345 75172 75174 Minus Contig2973 13690 94 SNP T/C tttacatgtaaattgcgaga gaatcttttgagactaatta TspDTI BsmAI chr2 AP004049 OJ1212_C06 112345 75185 75187 Minus Contig2973 13690 94 SNP A/C tgcgagatgaatcttttgag ctaattacgccatgatttga CviJI chr2 AP004049 OJ1212_C06 112345 75202 75204 Minus Contig2973 13690 94 SNP T/C gagactaattacgccatgat tgacaatgtggtgctacaat DpnI,BstKTI,BfuCI,Hpy188I chr2 AP004049 OJ1212_C06 112345 75325 75327 Minus Contig2973 13690 94 SNP C/T ttagtctacgttcaatactt aaatgtgtgtctgtatactt DraI,MseI chr2 AP004049 OJ1212_C06 112345 75347 75349 Minus Contig2973 13690 94 SNP G/A aatgtgtgtctgtatactta aaaaatttagcacaccaact DdeI MseI chr2 AP004049 OJ1212_C06 112345 75425 75427 Minus Contig2973 13690 94 IND 1 tttcttggatgttttttttt cgcgaacgcgcagaagaatt chr2 AP004049 OJ1212_C06 112345 75592 75594 Minus Contig2973 13690 94 SNP G/T gctaaaacagactccaagca cggaatggagctaagccacg Fnu4HI,BbvI,ApeKI,MspA1I SfaNI,MslI,Hpy188I chr2 AP004049 OJ1212_C06 112345 76008 76010 Minus Contig2973 13690 94 IND 1 gagctgatcataatcgatct ctagctagctagaacgtgag chr2 AP004049 OJ1212_C06 112345 76061 76063 Minus Contig2973 13690 94 SNP G/A gcaatatgttttgagaaatg tgcaaattggaattttaact chr2 AP004049 OJ1212_C06 112345 76102 76104 Minus Contig2973 13690 94 SNP G/A ttaattcctagcagtctcta tcatgcgtttggttcaaggg BfaI chr2 AP004049 OJ1212_C06 112345 76193 76195 Minus Contig2973 13690 94 SNP G/A aggagatgatccctgaaaga aatattatcctaaaatctgg chr2 AP004049 OJ1212_C06 112345 76346 76348 Minus Contig2973 13690 94 SNP G/A gtccaacccatcccacctca ctccaaatcaaacacaaact Bpu10I,BbvCI,DdeI,BspCNI,BseMII,CviJI,AluI chr2 AP004049 OJ1212_C06 112345 76382 76384 Minus Contig2973 13690 94 SNP G/A aaactaagggcatttacaac ttctactctgatgtgtatct AclI,TaiI,MaeII chr2 AP004049 OJ1212_C06 112345 76495 76497 Minus Contig2973 13690 94 SNP A/C tgagagtaaaagcaatggtc aggagaaatggatggttctg AvaII,Sau96I,PfoI,BssKI,BseBI,ScrFI,AjnI chr2 AP004049 OJ1212_C06 112345 76548 76550 Minus Contig2973 13690 94 SNP G/A aggcaacgaatgtgcaaatt ataagtcgtcgatctttcgt Hin4I VspI,MseI chr2 AP004049 OJ1212_C06 112345 76576 76578 Minus Contig2973 13690 94 SNP G/A gtcgatctttcgttatagac ctattgactaggccgctatg HgaI chr2 AP004049 OJ1212_C06 112345 76659 76661 Minus Contig2973 13690 94 SNP C/G ctttatcccctttgccatcg actagttagatttttcactt BtgZI Hpy188I chr2 AP004049 OJ1212_C06 112345 76808 76810 Minus Contig2973 13690 94 SNP T/C tgggaacattttgggtataa gagaatgggcttatgtaagt chr2 AP004049 OJ1212_C06 112345 76839 76841 Minus Contig2973 13690 94 SNP G/A ttatgtaagtcaaatccata ggaaagaaaatggtagtgcc chr2 AP004049 OJ1212_C06 112345 76867 76869 Minus Contig2973 13690 94 SNP C/T aaatggtagtgcccgaagcc gagctacggggagatagggg AvaI,BslI Bpu10I,DdeI chr2 AP004049 OJ1212_C06 112345 76906 76908 Minus Contig2973 13690 94 SNP C/T ggcaatggtggtcggacgag gaaggaagagcgttgattgt chr2 AP004049 OJ1212_C06 112345 77899 77900 Minus Contig2973 13690 94 IND -1 tagcctgtactaaacccccc tttttttttcttctctactt chr2 AP004049 OJ1212_C06 112345 77933 77934 Minus Contig2973 13690 94 IND -1 ctacttttatttcccttttt cctttttatggacaggtctt chr2 AP004049 OJ1212_C06 112345 77958 77960 Minus Contig2973 13690 94 SNP C/T ttatggacaggtctttttca tttactccccttgttcatgc TspDTI chr2 AP004049 OJ1212_C06 112345 78069 78071 Minus Contig2973 13690 94 SNP C/A tttggaatggtagtgacaca tgacactaacattcagtttg TspRI chr2 AP004049 OJ1212_C06 112345 78169 78171 Minus Contig2973 13690 94 SNP G/A tatagccacaaccacacaca tatgcatcgcagccgtagcg TaaI chr2 AP004049 OJ1212_C06 112345 78235 78237 Minus Contig2973 13690 94 SNP T/C tacccatagtgtatatattg aaagttgttatatacttaca CviRI chr2 AP004049 OJ1212_C06 112345 78246 78248 Minus Contig2973 13690 94 SNP T/G tatatattgtaaagttgtta atacttacaactgcattttc chr2 AP004049 OJ1212_C06 112345 78278 78280 Minus Contig2973 13690 94 SNP A/G tgcattttcgtagtactatt ttgtttttttaggtcggttt chr2 AP004049 OJ1212_C06 112345 78297 78299 Minus Contig2973 13690 94 SNP T/G tattgtttttttaggtcggt ttcgacgtagagtgaatgat chr2 AP004049 OJ1212_C06 112345 78358 78360 Minus Contig2973 13690 94 SNP C/G tagcggccgacgggctcact tcaaagttgggcagacgcaa TspRI,TaaI chr2 AP004049 OJ1212_C06 112345 78415 78417 Minus Contig2973 13690 94 SNP A/G gaagagcatgaaggggtcct gaggaagctaggcggcggaa BfaI PfoI,BssKI,BseBI,ScrFI,AjnI,Eco57MI,BpmI chr2 AP004049 OJ1212_C06 112345 78442 78444 Minus Contig2973 13690 94 SNP G/A gctaggcggcggaagaagcc gacagcacaatcgacagcgt MspI chr2 AP004049 OJ1212_C06 112345 78505 78507 Minus Contig2973 13690 94 SNP T/A gcgtgttgggccgcattcgg ggcaatggcaacgggacaaa Hpy188I chr2 AP004049 OJ1212_C06 112345 78509 78511 Minus Contig2973 13690 94 SNP A/G gttgggccgcattcggtggc atggcaacgggacaaaggtg BsrDI BtgZI chr2 AP004049 OJ1212_C06 112345 78627 78629 Minus Contig2973 13690 94 SNP T/C ctctattcttatcctctatt caagttctcccattatatat chr2 AP004049 OJ1212_C06 112345 78633 78635 Minus Contig2973 13690 94 SNP T/G tcttatcctctatttcaagt ctcccattatatataattct Bsp1286I,BsiHKAI chr2 AP004049 OJ1212_C06 112345 78753 78755 Minus Contig2973 13690 94 SNP G/A cacgctaaaatagaaagttt gttgaaattgcaacgatatg chr2 AP004049 OJ1212_C06 112345 78763 78765 Minus Contig2973 13690 94 SNP G/A tagaaagtttggttgaaatt caacgatatgatgaaaaagt CviRI chr2 AP004049 OJ1212_C06 112345 78799 78802 Minus Contig2973 13690 94 IND 2 aaagttgaaagtttgtgtgt agaaaaaatttaatgtgatg chr2 AP004049 OJ1212_C06 112345 78850 78852 Minus Contig2973 13690 94 SNP G/A gaagtttgaagaaaaatttt gaactaaactcggcctatgt chr2 AP004049 OJ1212_C06 112345 78866 78868 Minus Contig2973 13690 94 SNP T/A ttttggaactaaactcggcc atgttttttctatcgtgtga EaeI chr2 AP004049 OJ1212_C06 112345 78870 78872 Minus Contig2973 13690 94 SNP T/G ggaactaaactcggcctatg tttttctatcgtgtgattcg chr2 AP004049 OJ1212_C06 112345 78882 78884 Minus Contig2973 13690 94 SNP T/G ggcctatgttttttctatcg gtgattcgaatgagcccttg HphI chr2 AP004049 OJ1212_C06 112345 78884 79057 Minus Contig2973 13690 94 # chr2 AP004049 OJ1212_C06 112345 79248 79250 Minus Contig2973 13690 94 SNP A/C agagatgcaaaatggaaacc aacctgactaccttccctgt chr2 AP004049 OJ1212_C06 112345 79294 79295 Minus Contig2973 13690 94 IND -3 tgctaccctctcccttcttc cttcctcctctcttcacccc chr2 AP004049 OJ1212_C06 112345 79309 79311 Minus Contig2973 13690 94 SNP A/C tcttccttcctcctctcttc cccctgcactctgcactgcc chr2 AP004049 OJ1212_C06 112345 79441 79443 Minus Contig2973 13690 94 SNP T/C ccttagctcaggtcaaacct cttaattacccgaccggcat MnlI chr2 AP004049 OJ1212_C06 112345 85023 85027 Minus Contig83402 721 95 IND 3 tttgattaagggatttgtgc ccacatgttcagggagaggt chr2 AP004049 OJ1212_C06 112345 85027 85029 Minus Contig83402 721 95 IND 1 attaagggatttgtgcgtgc acatgttcagggagaggtca chr2 AP004049 OJ1212_C06 112345 85039 85041 Minus Contig83402 721 95 SNP G/A gtgcgtgccacatgttcagg agaggtcagcacagcgtttt Hpy188III,MboII chr2 AP004049 OJ1212_C06 112345 85099 85101 Minus Contig83402 721 95 SNP C/A atgcatggaactggaaactg aggtcaggtcagccaggtca BspMAI,SfcI,CviRI Eco57MI,AcuI chr2 AP004049 OJ1212_C06 112345 85190 85192 Minus Contig83402 721 95 IND 1 attatgtgggtttttttttt caaatagctggatatatact chr2 AP004049 OJ1212_C06 112345 85284 85286 Minus Contig83402 721 95 SNP A/G ttaaaatgatattccaaaaa tatactctctctatcttaaa Hpy8I,BstZ17I,AccI chr2 AP004049 OJ1212_C06 112345 85357 85359 Minus Contig83402 721 95 IND 1 tatatataaaatgttttttt aaaaaaaaatcacttattct chr2 AP004049 OJ1212_C06 112345 85365 85368 Minus Contig83402 721 95 IND 2 aaatgttttttttaaaaaaa tcacttattctacaagcacg chr2 AP004049 OJ1212_C06 112345 85370 85372 Minus Contig83402 721 95 SNP C/T ttttttttaaaaaaaaatca ttattctacaagcacgggaa chr2 AP004049 OJ1212_C06 112345 85398 85400 Minus Contig83402 721 95 SNP A/C acaagcacgggaagcatgcg atatatgcatatgatgacca FspAI,FspI,Hin6I,HhaI chr2 AP004049 OJ1212_C06 112345 85435 85437 Minus Contig83402 721 95 SNP C/T accatgtatataagagtata gcgagtgctggcctgcttga Hpy8I,BstZ17I,AccI,ThaI chr2 AP004049 OJ1212_C06 112345 85467 85469 Minus Contig83402 721 95 SNP T/C cctgcttgatctccttgagg atttcttttcatatcttaaa chr2 AP004049 OJ1212_C06 112345 85646 85648 Minus Contig83402 721 95 IND 1 ccctactgctatatatattc caaaattctgctccaggtag chr2 AP004049 OJ1212_C06 112345 85648 85651 Minus Contig83402 721 95 IND 2 ctactgctatatatattcac aattctgctccaggtagtcc chr2 AP004049 OJ1212_C06 112345 11405 11407 Plus Contig18515 5771 96 IND 1 aaaaaacaacattgtagata gtgcaaaaaagatcaataaa chr2 AP004049 OJ1212_C06 112345 11413 11414 Plus Contig18515 5771 96 IND -1 acattgtagataagtgcaaa aaagatcaataaaaaactga chr2 AP004049 OJ1212_C06 112345 11561 11562 Plus Contig18515 5771 96 IND -1 ctcccaccaagaacacttcc caaaaagcatcacacataag chr2 AP004049 OJ1212_C06 112345 11810 11812 Plus Contig18515 5771 96 SNP A/G gggccttacagaagatgtca taatttttttatggtttgtc chr2 AP004049 OJ1212_C06 112345 12114 12116 Plus Contig18515 5771 96 SNP T/G agggatctcagaatgcggat atttttcatgaacataacct FokI,BseGI chr2 AP004049 OJ1212_C06 112345 12325 12327 Plus Contig18515 5771 96 SNP T/A ggatatgagcgtagttaaac aagtc